STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHM00437.1Glycosyl hydrolase family 25; KEGG: lpl:lp_3093 2.5e-32 muramidase (putative) K01185. (382 aa)    
Predicted Functional Partners:
EHL95965.1
KEGG: lpj:JDM1_1672 1.4e-69 lytH; N-acetylmuramoyl-L-alanine amidase; K01448 N-acetylmuramoyl-L-alanine amidase.
  
 
 0.914
EHM01605.1
CAAX amino terminal protease family protein; KEGG: gfo:GFO_0014 2.4e-17 metal-dependent membrane protease K01376; Psort location: CytoplasmicMembrane, score: 10.00.
  
 
   0.671
EHL98916.1
KEGG: bmd:BMD_3135 3.1e-10 CAAX amino terminal protease family protein; Psort location: CytoplasmicMembrane, score: 10.00.
  
 
   0.648
EHM00099.1
KEGG: sds:SDEG_0144 1.7e-11 membrane-bound protease CAAX family K07052; Psort location: CytoplasmicMembrane, score: 10.00.
    
   0.595
EHL99063.1
KEGG: sds:SDEG_1426 2.3e-12 CAAX amino terminal protease family protein; Psort location: CytoplasmicMembrane, score: 10.00.
    
   0.595
EHL98950.1
KEGG: sds:SDEG_0144 5.8e-14 membrane-bound protease CAAX family K07052; Psort location: CytoplasmicMembrane, score: 10.00.
    
   0.595
EHL96831.1
CAAX amino terminal protease family protein; Psort location: CytoplasmicMembrane, score: 10.00.
    
   0.595
EHL96605.1
CAAX amino terminal protease family protein; KEGG: epy:EpC_08750 0.0074 cdsA; CDP-diglyceride synthase K00981; Psort location: CytoplasmicMembrane, score: 10.00.
    
   0.595
EHL96111.1
CAAX amino terminal protease family protein; Psort location: CytoplasmicMembrane, score: 10.00.
    
   0.595
EHL95290.1
CAAX amino terminal protease family protein; Psort location: CytoplasmicMembrane, score: 10.00.
    
   0.595
Your Current Organism:
Lactobacillus parafarraginis
NCBI taxonomy Id: 797515
Other names: L. parafarraginis F0439, Lactobacillus parafarraginis F0439, Lactobacillus parafarraginis str. F0439, Lactobacillus parafarraginis strain F0439, Lactobacillus sp. oral taxon 418 str. F0439
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