STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHM00441.1Hypothetical protein; Psort location: Cytoplasmic, score: 8.96. (656 aa)    
Predicted Functional Partners:
EHM00440.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
 
     0.774
EHL96506.1
KEGG: lbr:LVIS_1750 1.4e-184 alpha-L-arabinofuranosidase; K01209 alpha-N-arabinofuranosidase; Psort location: Cytoplasmic, score: 9.97.
 
     0.697
EHM01175.1
Hypothetical protein.
 
     0.500
EHL96509.1
Transcriptional regulator, AraC family; KEGG: btb:BMB171_C3413 2.4e-12 adaA; ADA regulatory protein; K13530 AraC family transcriptional regulator, regulatory protein of adaptative response / methylphosphotriester-DNA alkyltransferase methyltransferase; Psort location: Cytoplasmic, score: 9.97.
 
     0.459
EHM00439.1
Transcriptional regulator, AraC family; KEGG: bha:BH0394 3.3e-11 adaA; methylphosphotriester-DNA alkyltransferase K13530; Psort location: Cytoplasmic, score: 9.26.
 
     0.453
EHM01176.1
KEGG: sdn:Sden_2531 0.00027 Ada, metal-binding; K13529 AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II.
  
     0.410
Your Current Organism:
Lactobacillus parafarraginis
NCBI taxonomy Id: 797515
Other names: L. parafarraginis F0439, Lactobacillus parafarraginis F0439, Lactobacillus parafarraginis str. F0439, Lactobacillus parafarraginis strain F0439, Lactobacillus sp. oral taxon 418 str. F0439
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.