STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHM00346.1KEGG: lpl:lp_2110 6.1e-90 glnQ3; glutamine ABC transporter, ATP-binding protein; K02028 polar amino acid transport system ATP-binding protein; Psort location: CytoplasmicMembrane, score: 9.82. (249 aa)    
Predicted Functional Partners:
EHM00347.1
KEGG: npu:Npun_F6325 1.2e-70 polar amino acid ABC transporter, inner membrane subunit K02029:K02030; Psort location: CytoplasmicMembrane, score: 10.00.
 0.996
EHM00419.1
KEGG: hpa:HPAG1_0922 2.6e-43 amino acid ABC transporter, permease protein K02029; Psort location: CytoplasmicMembrane, score: 10.00.
 0.994
EHM01241.1
KEGG: llm:llmg_1942 9.5e-29 glnP; glutamine ABC transporter permease and substrate binding protein K02029:K02030; Psort location: CytoplasmicMembrane, score: 10.00.
 0.993
EHM01240.1
KEGG: llm:llmg_1942 1.3e-35 glnP; glutamine ABC transporter permease and substrate binding protein K02029:K02030; Psort location: CytoplasmicMembrane, score: 10.00.
 0.991
EHM01116.1
Putative arginine ABC transporter, permease protein ArtQ; KEGG: rcm:A1E_00665 1.5e-31 sdhA; succinate dehydrogenase flavoprotein subunit; Psort location: CytoplasmicMembrane, score: 10.00.
 0.990
EHL96242.1
ABC transporter, permease protein; KEGG: llm:llmg_1942 8.1e-159 glnP; glutamine ABC transporter permease and substrate binding protein K02029:K02030; Psort location: CytoplasmicMembrane, score: 10.00.
 0.984
EHL95611.1
Putative arginine ABC transporter, permease protein ArtQ.
 0.976
EHM00402.1
ABC transporter, permease protein; KEGG: aci:ACIAD3488 1.6e-28 amino acid ABC transporter ATP-binding protein; K02028 polar amino acid transport system ATP-binding protein K02029; Psort location: CytoplasmicMembrane, score: 10.00.
 0.974
EHM01117.1
ABC transporter, substrate-binding protein, family 3; KEGG: cco:CCC13826_0411 1.9e-24 UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase; Psort location: Periplasmic, score: 9.44.
 
 0.969
EHM00904.1
KEGG: cat:CA2559_11248 7.5e-37 ABC transporter, ATP-binding protein; K11085 ATP-binding cassette, subfamily B, bacterial MsbA.
 
    
0.910
Your Current Organism:
Lactobacillus parafarraginis
NCBI taxonomy Id: 797515
Other names: L. parafarraginis F0439, Lactobacillus parafarraginis F0439, Lactobacillus parafarraginis str. F0439, Lactobacillus parafarraginis strain F0439, Lactobacillus sp. oral taxon 418 str. F0439
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