STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHM00366.1comEA protein; KEGG: hor:Hore_06940 3.6e-06 glycogen/starch synthase, ADP-glucose type K00703. (227 aa)    
Predicted Functional Partners:
EHM00364.1
KEGG: apb:SAR116_0501 2.2e-05 possible DNA uptake protein, ComEC K02238; Psort location: CytoplasmicMembrane, score: 10.00.
 
  
 0.906
EHM00365.1
ComE operon protein 2; KEGG: lpj:JDM1_1785 3.8e-65 comEB; dCMP deaminase; K01493 dCMP deaminase.
  
    0.805
EHL95569.1
ComG operon protein 1 family protein.
  
  
 0.804
EHM00639.1
Hypothetical protein; KEGG: llm:llmg_1483 2.4e-13 comFA; superfamily II DNA/RNA helicase K02240; Psort location: Cytoplasmic, score: 9.26.
   
  
 0.782
EHM00640.1
KEGG: bmq:BMQ_5117 7.4e-46 comFA; ComFA competence protein K02240; Psort location: Cytoplasmic, score: 9.97.
   
  
 0.782
coaD
Pantetheine-phosphate adenylyltransferase; Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate. Belongs to the bacterial CoaD family.
      0.766
EHL95567.1
Bacterial type II secretion system protein F domain protein.
  
  
 0.754
EHL95568.1
Hypothetical protein.
  
  
 0.754
EHL99175.1
Bacterial peptidase A24 protein; KEGG: sga:GALLO_0591 4.8e-26 putative peptidase; K02236 leader peptidase (prepilin peptidase) / N-methyltransferase; Psort location: CytoplasmicMembrane, score: 10.00.
   
  
 0.744
EHL95566.1
ComG operon protein 3 family protein.
   
  
 0.738
Your Current Organism:
Lactobacillus parafarraginis
NCBI taxonomy Id: 797515
Other names: L. parafarraginis F0439, Lactobacillus parafarraginis F0439, Lactobacillus parafarraginis str. F0439, Lactobacillus parafarraginis strain F0439, Lactobacillus sp. oral taxon 418 str. F0439
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.