STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHM00197.1Macro domain protein; KEGG: noc:Noc_1830 7.5e-21 Appr-1-p processing; Psort location: Cytoplasmic, score: 8.96. (264 aa)    
Predicted Functional Partners:
EHM00198.1
Hypothetical protein; KEGG: hit:NTHI1634 8.0e-08 NAD-dependent deacetylase sirtuin 5 K01463; Psort location: Cytoplasmic, score: 8.96.
 
  0.981
EHM00199.1
KEGG: slg:SLGD_00254 2.3e-97 lipoate-protein ligase A; K03800 lipoate-protein ligase A; Psort location: Cytoplasmic, score: 9.97.
       0.767
EHM00195.1
KEGG: sha:SH0268 1.7e-23 hypothetical protein; K00317 trimethylamine dehydrogenase.
 
    0.725
EHM00196.1
KEGG: tbr:Tb09.211.1380 4.8e-10 glycine cleavage system H protein K02437.
     
 0.642
EHM00200.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
       0.585
EHL97133.1
Guanine/hypoxanthine permease PbuG; KEGG: btk:BT9727_0241 7.3e-126 guanine-hypoxanthine permease; xanthine/uracil permease family protein K06901; Psort location: CytoplasmicMembrane, score: 10.00.
      0.466
EHM00194.1
Hypothetical protein.
       0.421
Your Current Organism:
Lactobacillus parafarraginis
NCBI taxonomy Id: 797515
Other names: L. parafarraginis F0439, Lactobacillus parafarraginis F0439, Lactobacillus parafarraginis str. F0439, Lactobacillus parafarraginis strain F0439, Lactobacillus sp. oral taxon 418 str. F0439
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.