STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHM00204.1Peptidase C26; KEGG: lwe:lwe1814 8.1e-40 glutamine amidotransferase, class-I K07010; Psort location: Cytoplasmic, score: 8.96. (240 aa)    
Predicted Functional Partners:
EHL99763.1
Putative glutamate synthase [NADPH], large subunit; KEGG: lca:LSEI_2556 0. glutamate synthase domain-containing 3; K00265 glutamate synthase (NADPH/NADH) large chain; Psort location: Cytoplasmic, score: 9.26.
    
  0.903
EHM00205.1
Hypothetical protein; KEGG: sah:SaurJH1_1008 2.2e-37 4-phytase K02035; Psort location: Periplasmic, score: 9.44.
       0.757
EHM00206.1
Hypothetical protein; KEGG: esi:Exig_2057 1.6e-20 4-phytase; Psort location: Periplasmic, score: 9.44.
       0.661
EHL99641.1
KEGG: lbr:LVIS_0990 9.6e-211 glutamine synthetase; K01915 glutamine synthetase; Psort location: Cytoplasmic, score: 9.97.
  
 
 0.632
EHL98911.1
Hypothetical protein.
   
    0.465
Your Current Organism:
Lactobacillus parafarraginis
NCBI taxonomy Id: 797515
Other names: L. parafarraginis F0439, Lactobacillus parafarraginis F0439, Lactobacillus parafarraginis str. F0439, Lactobacillus parafarraginis strain F0439, Lactobacillus sp. oral taxon 418 str. F0439
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.