STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHM00094.1Amidohydrolase family protein; KEGG: bmd:BMD_4787 1.6e-43 amidohydrolase K07047. (531 aa)    
Predicted Functional Partners:
EHM00093.1
KEGG: apb:SAR116_1449 0.0086 membrane protein; Psort location: CytoplasmicMembrane, score: 10.00.
       0.528
EHL95178.1
Dipeptidase; KEGG: lre:Lreu_1384 8.8e-153 transaminase; Psort location: Cytoplasmic, score: 9.97.
  
     0.520
EHM00095.1
Methyltransferase domain protein; KEGG: hma:rrnAC3101 9.4e-46 methyltransferase K00599; Psort location: Cytoplasmic, score: 9.97.
       0.519
EHM00096.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
       0.519
EHL99119.1
Phosphogluconate dehydrogenase, NAD binding domain protein; KEGG: lbr:LVIS_1796 7.8e-90 3-hydroxyisobutyrate dehydrogenase related beta-hydroxyacid dehydrogenase; K00020 3-hydroxyisobutyrate dehydrogenase; Psort location: Cytoplasmic, score: 9.26.
    
  0.442
EHL98377.1
Phosphogluconate dehydrogenase, NAD binding domain protein; KEGG: pfr:PFREUD_19890 1.4e-51 mmsB; 3-hydroxyisobutyrate dehydrogenase related beta-hydroxyacid dehydrogenase; Psort location: Cytoplasmic, score: 9.97.
    
  0.442
EHM00187.1
KEGG: par:Psyc_1604 4.7e-60 D-cysteine desulfhydrase K05396; Psort location: Cytoplasmic, score: 9.97.
  
     0.432
EHM00804.1
Hypothetical protein; KEGG: ppe:PEPE_1074 4.5e-07 purine deoxyribosyltransferase K08728.
  
     0.416
Your Current Organism:
Lactobacillus parafarraginis
NCBI taxonomy Id: 797515
Other names: L. parafarraginis F0439, Lactobacillus parafarraginis F0439, Lactobacillus parafarraginis str. F0439, Lactobacillus parafarraginis strain F0439, Lactobacillus sp. oral taxon 418 str. F0439
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.