STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHM00106.1Alpha amylase, catalytic domain protein; KEGG: lbr:LVIS_0309 4.4e-151 trehalose-6-phosphate hydrolase; K01187 alpha-glucosidase; Psort location: Cytoplasmic, score: 9.26. (552 aa)    
Predicted Functional Partners:
EHM00105.1
KEGG: lci:LCK_01248 6.0e-190 sucrose phosphorylase K00690; Psort location: Cytoplasmic, score: 9.26.
 
 
0.978
EHL97079.1
Putative fructokinase; KEGG: ooe:OEOE_1708 2.9e-99 branched chain amino acid: 2-keto-4-methylthiobutyrate aminotransferase / fructokinase K00847; Psort location: Cytoplasmic, score: 9.97.
  
 
 0.869
EHL99741.1
Glycosyl hydrolase family 65 central catalytic domain protein; KEGG: lpl:lp_3530 1.3e-128 map4; maltose phosphorylase K00691; Psort location: Cytoplasmic, score: 8.96.
  
 
 0.864
EHL99058.1
Glycosyl hydrolase family 65 central catalytic domain protein; KEGG: lpl:lp_0028 5.8e-275 map1; maltose phosphorylase K00691; Psort location: Cytoplasmic, score: 8.96.
  
 
 0.864
EHL97076.1
Glycosyl hydrolase family 65 central catalytic domain protein; KEGG: lbr:LVIS_0358 0. maltose phosphorylase; K00691 maltose phosphorylase; Psort location: Periplasmic, score: 9.83.
  
 
 0.864
EHL97875.1
Glycosyl hydrolase family 3 protein; KEGG: lcb:LCABL_07640 1.1e-83 bglB; thermostable beta-glucosidase B (gentiobiase) (cellobiase) (beta-D-glucoside glucohydrolase) K05349; Psort location: Periplasmic, score: 9.44; overlaps another CDS with the same product name.
   
 
 0.857
EHL97876.1
Glycosyl hydrolase family 3 protein; KEGG: lrh:LGG_00685 4.9e-159 bglX; beta-glucosidase (GH3); K05349 beta-glucosidase; Psort location: Periplasmic, score: 9.44; overlaps another CDS with the same product name.
   
 
 0.857
EHM00108.1
Hypothetical protein; KEGG: cbe:Cbei_0731 9.3e-14 alanine racemase K02529; Psort location: Cytoplasmic, score: 9.97.
 
 
 0.669
EHM00107.1
Transcriptional regulator, LacI family; KEGG: hiq:CGSHiGG_09905 1.5e-22 DNA-binding transcriptional repressor PurR K03604; Psort location: Cytoplasmic, score: 9.26.
  
 
 0.613
EHM01247.1
Putative serine/threonine exchanger SteT; KEGG: sds:SDEG_0016 2.7e-19 amino acid permease K03294; Psort location: CytoplasmicMembrane, score: 10.00.
    
  0.609
Your Current Organism:
Lactobacillus parafarraginis
NCBI taxonomy Id: 797515
Other names: L. parafarraginis F0439, Lactobacillus parafarraginis F0439, Lactobacillus parafarraginis str. F0439, Lactobacillus parafarraginis strain F0439, Lactobacillus sp. oral taxon 418 str. F0439
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.