STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHM00107.1Transcriptional regulator, LacI family; KEGG: hiq:CGSHiGG_09905 1.5e-22 DNA-binding transcriptional repressor PurR K03604; Psort location: Cytoplasmic, score: 9.26. (167 aa)    
Predicted Functional Partners:
EHM00108.1
Hypothetical protein; KEGG: cbe:Cbei_0731 9.3e-14 alanine racemase K02529; Psort location: Cytoplasmic, score: 9.97.
     0.994
EHL99763.1
Putative glutamate synthase [NADPH], large subunit; KEGG: lca:LSEI_2556 0. glutamate synthase domain-containing 3; K00265 glutamate synthase (NADPH/NADH) large chain; Psort location: Cytoplasmic, score: 9.26.
    
 
 0.790
EHL98463.1
Sugar-binding domain protein; KEGG: rmr:Rmar_2788 1.5e-29 transcriptional regulator, LacI family; Psort location: Cytoplasmic, score: 9.26.
  
   
 0.780
EHM01243.1
KEGG: hor:Hore_04570 2.7e-41 transcriptional regulator, LacI family K02529; Psort location: Cytoplasmic, score: 9.26.
  
     0.773
EHM00446.1
KEGG: hor:Hore_13150 1.1e-28 transcriptional regulator, LacI family K02529; Psort location: Cytoplasmic, score: 9.97.
  
   
 0.770
EHL98519.1
KEGG: hor:Hore_00410 3.7e-28 transcriptional regulator, LacI family; Psort location: Cytoplasmic, score: 9.97.
  
   
 0.770
EHM00011.1
Transcriptional regulator, LacI family; KEGG: fno:Fnod_0418 1.6e-16 alanine racemase K02529; Psort location: Cytoplasmic, score: 8.96.
  
   
 0.768
rbsK
Ribokinase; Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5-phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway.
 
 0.729
EHL98505.1
Putative arabinose metabolism transcriptional repressor; KEGG: ctu:Ctu_01760 5.4e-27 cytR; DNA-binding transcriptional regulator CytR; Psort location: Cytoplasmic, score: 9.97.
  
     0.723
EHL99282.1
Phosphocarrier protein HPr; KEGG: lcb:LCABL_19790 7.4e-30 ptsH; phosphocarrier protein HPr K11189; Psort location: Cytoplasmic, score: 9.26.
   
 
 0.703
Your Current Organism:
Lactobacillus parafarraginis
NCBI taxonomy Id: 797515
Other names: L. parafarraginis F0439, Lactobacillus parafarraginis F0439, Lactobacillus parafarraginis str. F0439, Lactobacillus parafarraginis strain F0439, Lactobacillus sp. oral taxon 418 str. F0439
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.