STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHM00108.1Hypothetical protein; KEGG: cbe:Cbei_0731 9.3e-14 alanine racemase K02529; Psort location: Cytoplasmic, score: 9.97. (161 aa)    
Predicted Functional Partners:
EHM00107.1
Transcriptional regulator, LacI family; KEGG: hiq:CGSHiGG_09905 1.5e-22 DNA-binding transcriptional repressor PurR K03604; Psort location: Cytoplasmic, score: 9.26.
     0.994
EHL99763.1
Putative glutamate synthase [NADPH], large subunit; KEGG: lca:LSEI_2556 0. glutamate synthase domain-containing 3; K00265 glutamate synthase (NADPH/NADH) large chain; Psort location: Cytoplasmic, score: 9.26.
    
 
 0.790
EHL98463.1
Sugar-binding domain protein; KEGG: rmr:Rmar_2788 1.5e-29 transcriptional regulator, LacI family; Psort location: Cytoplasmic, score: 9.26.
  
   
 0.776
EHL98939.1
Putative ribose operon repressor; KEGG: bpy:Bphyt_2260 2.0e-29 transcriptional regulator, LacI family K02529; Psort location: Cytoplasmic, score: 9.26.
  
     0.774
EHM00011.1
Transcriptional regulator, LacI family; KEGG: fno:Fnod_0418 1.6e-16 alanine racemase K02529; Psort location: Cytoplasmic, score: 8.96.
  
   
 0.763
EHM01243.1
KEGG: hor:Hore_04570 2.7e-41 transcriptional regulator, LacI family K02529; Psort location: Cytoplasmic, score: 9.26.
  
     0.762
EHM00074.1
KEGG: gwc:GWCH70_1482 3.4e-32 transcriptional regulator, LacI family K02529; Psort location: Cytoplasmic, score: 9.26.
 
     0.760
EHM00446.1
KEGG: hor:Hore_13150 1.1e-28 transcriptional regulator, LacI family K02529; Psort location: Cytoplasmic, score: 9.97.
  
   
 0.757
EHL96115.1
KEGG: gwc:GWCH70_0699 3.2e-36 transcriptional regulator, LacI family; Psort location: Cytoplasmic, score: 9.97.
  
     0.751
EHL98519.1
KEGG: hor:Hore_00410 3.7e-28 transcriptional regulator, LacI family; Psort location: Cytoplasmic, score: 9.97.
  
   
 0.745
Your Current Organism:
Lactobacillus parafarraginis
NCBI taxonomy Id: 797515
Other names: L. parafarraginis F0439, Lactobacillus parafarraginis F0439, Lactobacillus parafarraginis str. F0439, Lactobacillus parafarraginis strain F0439, Lactobacillus sp. oral taxon 418 str. F0439
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.