STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHM00022.1Amidohydrolase family protein; KEGG: bpt:Bpet0100 1.2e-47 imidazolonepropionase; Psort location: Cytoplasmic, score: 8.96. (421 aa)    
Predicted Functional Partners:
EHL98722.1
FAH family protein; KEGG: lpl:lp_0931 2.2e-53 hpaG; 2-hydroxyhepta-2,4-diene-1,7-dioateisomerase / 5-carboxymethyl-2-oxo-hex-3-ene-1,7-dioatedecarboxylase (putative); Psort location: Cytoplasmic, score: 9.26.
      0.884
EHL95195.1
KEGG: lrl:pLC705_00041 1.9e-63 cysE; serine O-acetyltransferase; K00640 serine O-acetyltransferase; Psort location: Cytoplasmic, score: 9.26.
  
 
 0.851
EHL95866.1
KEGG: lrh:LGG_01594 8.1e-56 hutG; N-formylglutamate amidohydrolase; K01479 formiminoglutamase; Psort location: Cytoplasmic, score: 8.96.
  
  
 0.778
EHL98371.1
Cytosine deaminase; KEGG: lbr:LVIS_1932 2.0e-169 dihydroorotase; K01485 cytosine deaminase; Psort location: Cytoplasmic, score: 9.97.
  
 
 0.719
EHM00020.1
KEGG: sga:GALLO_1481 1.4e-10 putative chorismate mutase; K04516 chorismate mutase; Psort location: Cytoplasmic, score: 8.96.
 
     0.560
EHL99528.1
UbiC transcription regulator-associated domain protein; KEGG: btk:BT9727_3183 1.8e-26 GntR family transcriptional regulator K00837; Psort location: Cytoplasmic, score: 9.97.
  
 
 0.512
EHL98441.1
UbiC transcription regulator-associated domain protein; KEGG: btk:BT9727_3183 2.3e-19 GntR family transcriptional regulator K00837; Psort location: Cytoplasmic, score: 9.97.
  
 
 0.512
aroC
Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system.
       0.480
EHM00021.1
Hypothetical protein.
       0.461
EHL98838.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
    
 0.457
Your Current Organism:
Lactobacillus parafarraginis
NCBI taxonomy Id: 797515
Other names: L. parafarraginis F0439, Lactobacillus parafarraginis F0439, Lactobacillus parafarraginis str. F0439, Lactobacillus parafarraginis strain F0439, Lactobacillus sp. oral taxon 418 str. F0439
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.