STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHL99855.1Hypothetical protein. (126 aa)    
Predicted Functional Partners:
EHL96593.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
 
 
    0.854
EHL99852.1
Hypothetical protein.
       0.782
EHL99853.1
Phage terminase, large subunit, PBSX family; Psort location: Cytoplasmic, score: 8.96.
       0.782
EHL99854.1
Phage portal protein, SPP1 family.
       0.780
EHL99851.1
Terminase small subunit; Psort location: Cytoplasmic, score: 8.96.
  
    0.777
EHL96119.1
Hypothetical protein.
  
 
 0.666
EHL96123.1
Hypothetical protein; KEGG: oaa:100083347 7.5e-10 similar to citron; K08282 non-specific serine/threonine protein kinase; Psort location: Cytoplasmic, score: 8.96.
  
 
 0.666
smc
Segregation protein SMC; Required for chromosome condensation and partitioning. Belongs to the SMC family.
  
 
 0.666
EHL98323.1
LPXTG-motif protein cell wall anchor domain protein; KEGG: isc:IscW_ISCW000348 2.9e-09 secreted mucin MUC17, putative.
   
 
 0.542
EHL95350.1
Hypothetical protein; KEGG: afw:Anae109_3812 1.1e-08 dimethyladenosine transferase; K02528 dimethyladenosine transferase; Psort location: Extracellular, score: 8.44.
   
 
 0.542
Your Current Organism:
Lactobacillus parafarraginis
NCBI taxonomy Id: 797515
Other names: L. parafarraginis F0439, Lactobacillus parafarraginis F0439, Lactobacillus parafarraginis str. F0439, Lactobacillus parafarraginis strain F0439, Lactobacillus sp. oral taxon 418 str. F0439
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.