STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHL99738.1Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain protein; KEGG: lbr:LVIS_2026 1.6e-73 ornithine carbamoyltransferase K00611; Psort location: Cytoplasmic, score: 9.26. (178 aa)    
Predicted Functional Partners:
EHL99739.1
Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain protein; KEGG: lbr:LVIS_2026 1.1e-72 ornithine carbamoyltransferase K00611; Psort location: Cytoplasmic, score: 9.97.
     0.994
argG
KEGG: lpj:JDM1_0642 8.6e-155 argG; argininosuccinate synthase; K01940 argininosuccinate synthase; Psort location: Cytoplasmic, score: 9.26; Belongs to the argininosuccinate synthase family. Type 1 subfamily.
  
 
 0.971
argJ
Glutamate N-acetyltransferase/amino-acid acetyltransferase; Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis: the synthesis of N-acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate. Belongs to the ArgJ family.
  
 
 0.967
carA
KEGG: lmf:LMOf2365_1864 7.0e-89 carA; carbamoyl phosphate synthase small subunit K01956; Psort location: Cytoplasmic, score: 9.26; Belongs to the CarA family.
  
 
 0.906
carA-2
KEGG: lpj:JDM1_1499 1.4e-124 pyrAA2; carbamoyl phosphate synthase small subunit; K01956 carbamoyl-phosphate synthase small subunit; Psort location: Cytoplasmic, score: 9.97; Belongs to the CarA family.
  
 
 0.906
EHL97514.1
KEGG: lfe:LAF_0728 0. carbamoyl-phosphate synthase large subunit; K01955 carbamoyl-phosphate synthase large subunit; Psort location: Cytoplasmic, score: 9.97.
  
 
 0.899
EHL95876.1
Carbamoyl-phosphate synthetase, large subunit, oligomerization domain protein; KEGG: lbr:LVIS_0829 1.2e-212 carbamoylphosphate synthase large subunit; K01955 carbamoyl-phosphate synthase large subunit; Psort location: Cytoplasmic, score: 9.97.
  
 
 0.899
pyrB
KEGG: lpl:lp_2703 1.2e-98 pyrB; aspartate carbamoyltransferase catalytic subunit K00609; Psort location: Cytoplasmic, score: 9.97; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family.
   
 0.894
EHL95337.1
Putative succinylornithine transaminase; KEGG: lfe:LAF_0723 3.7e-122 argD; acetylornithine aminotransferase; K00818 acetylornithine aminotransferase; Psort location: Cytoplasmic, score: 9.97.
 
 
 0.882
argB
Acetylglutamate kinase; Catalyzes the ATP-dependent phosphorylation of N-acetyl-L- glutamate; Belongs to the acetylglutamate kinase family. ArgB subfamily.
  
 
 0.868
Your Current Organism:
Lactobacillus parafarraginis
NCBI taxonomy Id: 797515
Other names: L. parafarraginis F0439, Lactobacillus parafarraginis F0439, Lactobacillus parafarraginis str. F0439, Lactobacillus parafarraginis strain F0439, Lactobacillus sp. oral taxon 418 str. F0439
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.