STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHL99748.1SNARE-like domain protein; KEGG: lsl:LSL_1322 5.4e-50 alkaline phosphatase K01077; Psort location: CytoplasmicMembrane, score: 10.00. (207 aa)    
Predicted Functional Partners:
folE
GTP cyclohydrolase I; KEGG: lhe:lhv_1202 6.3e-143 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase/GTP cyclohydrolase I; K00950 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase K01495; Psort location: Cytoplasmic, score: 9.97.
  
 
  0.853
EHL99749.1
Oxidoreductase, aldo/keto reductase family protein; KEGG: lpl:lp_3100 7.9e-113 oxidoreductase K00540; Psort location: Cytoplasmic, score: 9.97.
       0.533
EHL99750.1
DNA/RNA non-specific endonuclease; KEGG: ljf:FI9785_1579 2.2e-69 endA; extracellular/cell surface DNA-entry nuclease; Psort location: CytoplasmicMembrane, score: 9.82.
 
     0.452
Your Current Organism:
Lactobacillus parafarraginis
NCBI taxonomy Id: 797515
Other names: L. parafarraginis F0439, Lactobacillus parafarraginis F0439, Lactobacillus parafarraginis str. F0439, Lactobacillus parafarraginis strain F0439, Lactobacillus sp. oral taxon 418 str. F0439
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.