STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHL99647.1Peroxiredoxin, Ohr subfamily; KEGG: bsu:BSU13140 3.7e-19 ohrA; peroxiredoxin; Psort location: Cytoplasmic, score: 9.26. (158 aa)    
Predicted Functional Partners:
EHM01484.1
Putative organic hydroperoxide resistance transcriptional regulator; KEGG: dsh:Dshi_0779 3.5e-06 transcriptional regulator; Psort location: Cytoplasmic, score: 9.97.
 
  
 0.759
EHL99263.1
Catalase; KEGG: lpj:JDM1_2859 1.4e-184 kat; catalase; K03781 catalase.
  
  
 0.493
EHL99648.1
Serine/threonine exchanger SteT domain protein; KEGG: sds:SDEG_0016 2.2e-07 amino acid permease K03294; Psort location: CytoplasmicMembrane, score: 10.00.
       0.477
EHL99649.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00.
       0.477
EHL98211.1
CsbD-like protein; Belongs to the UPF0337 (CsbD) family.
   
  
 0.471
rexB
Putative ATP-dependent nuclease subunit B; ATP-dependent DNA helicase.
   
    0.465
EHL98023.1
Ferritin-like protein; KEGG: sph:MGAS10270_Spy1275 1.4e-28 dpr; non-specific DNA-binding protein Dps / iron-binding ferritin-like antioxidant protein / ferroxidase K04047; Psort location: Cytoplasmic, score: 9.26; Belongs to the Dps family.
  
  
 0.447
EHL95213.1
Hypothetical protein; KEGG: lsl:LSL_1781 8.0e-17 dps; non-specific DNA-binding protein / iron-binding ferritin-like antioxidant protein / ferroxidase K04047; Belongs to the Dps family.
  
  
 0.447
EHL97128.1
General stress protein 18; KEGG: lrl:LC705_00015 3.9e-63 pfpI; intracellular protease PfpI family; K05520 protease I; Psort location: Cytoplasmic, score: 9.26.
  
    0.417
EHM00263.1
LysM domain protein; KEGG: lfe:LAF_1820 2.3e-13 hypothetical protein; K01185 lysozyme; Psort location: Extracellular, score: 9.65.
   
    0.407
Your Current Organism:
Lactobacillus parafarraginis
NCBI taxonomy Id: 797515
Other names: L. parafarraginis F0439, Lactobacillus parafarraginis F0439, Lactobacillus parafarraginis str. F0439, Lactobacillus parafarraginis strain F0439, Lactobacillus sp. oral taxon 418 str. F0439
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