STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHL99627.1HesB-like protein. (103 aa)    
Predicted Functional Partners:
EHM00958.1
KEGG: sds:SDEG_1039 6.7e-36 lipoate-protein ligase A.
  
     0.774
EHL97983.1
Hypothetical protein; KEGG: lbr:LVIS_0668 2.7e-55 esterase/lipase; K03928 carboxylesterase.
  
    0.771
mecA
Negative regulator of genetic competence; Enables the recognition and targeting of unfolded and aggregated proteins to the ClpC protease or to other proteins involved in proteolysis.
  
     0.590
EHM00706.1
Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex.
  
     0.585
greA-2
Transcription elongation factor GreA; Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides.
       0.542
EHL98325.1
Hypothetical protein; KEGG: lsl:LSL_1721 5.3e-20 acyl-CoA hydrolase K01073; Psort location: Cytoplasmic, score: 8.96.
  
     0.528
EHL98464.1
OsmC-like protein; KEGG: cti:RALTA_B0122 4.4e-09 organic hydroperoxide resistance protein, OsmC family.
  
    0.494
EHL98524.1
Hypothetical protein; KEGG: ngo:NGO1404 3.1e-08 glycine cleavage system protein H K02437.
  
     0.483
EHM00705.1
Pyridine nucleotide-disulfide oxidoreductase.
  
     0.476
EHM01474.1
Hypothetical protein; Belongs to the UPF0342 family.
  
     0.458
Your Current Organism:
Lactobacillus parafarraginis
NCBI taxonomy Id: 797515
Other names: L. parafarraginis F0439, Lactobacillus parafarraginis F0439, Lactobacillus parafarraginis str. F0439, Lactobacillus parafarraginis strain F0439, Lactobacillus sp. oral taxon 418 str. F0439
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.