STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHL99634.1Hypothetical protein. (74 aa)    
Predicted Functional Partners:
EHL99635.1
Putative glucokinase; KEGG: lbr:LVIS_0996 8.6e-123 transcriptional regulator/sugar kinase; K00845 glucokinase; Psort location: Cytoplasmic, score: 9.26.
  
    0.843
EHL99636.1
Rhodanese-like protein; KEGG: sax:USA300HOU_1535 1.2e-22 sulfurtransferase.
 
     0.796
EHL99633.1
Peptidase, S54 family; KEGG: bmd:BMD_4489 1.2e-38 glpG; membrane endopeptidase; Psort location: CytoplasmicMembrane, score: 10.00.
       0.734
EHM00711.1
Hypothetical protein; Belongs to the UPF0356 family.
  
    0.700
EHL99632.1
KEGG: lfe:LAF_1282 7.7e-35 5-formyltetrahydrofolate cyclo-ligase; K01934 5-formyltetrahydrofolate cyclo-ligase; Belongs to the 5-formyltetrahydrofolate cyclo-ligase family.
       0.662
EHL95909.1
Hypothetical protein; KEGG: spz:M5005_Spy_0383 1.2e-13 hypothetical protein; K01286 D-alanyl-D-alanine carboxypeptidase; Belongs to the UPF0346 family.
  
     0.623
EHL95918.1
Tetratricopeptide repeat protein; KEGG: tet:TTHERM_01109810 2.8e-09 Tubulin-tyrosine ligase family protein; Psort location: Cytoplasmic, score: 8.96.
 
     0.615
rpsK
30S ribosomal protein S11; Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine- Dalgarno cleft in the 70S ribosome; Belongs to the universal ribosomal protein uS11 family.
   
    0.572
EHM00757.1
Hypothetical protein; KEGG: lre:Lreu_0587 4.7e-22 peptidoglycan glycosyltransferase K08724; Psort location: CytoplasmicMembrane, score: 9.82.
 
     0.508
EHL95670.1
Hypothetical protein.
  
     0.474
Your Current Organism:
Lactobacillus parafarraginis
NCBI taxonomy Id: 797515
Other names: L. parafarraginis F0439, Lactobacillus parafarraginis F0439, Lactobacillus parafarraginis str. F0439, Lactobacillus parafarraginis strain F0439, Lactobacillus sp. oral taxon 418 str. F0439
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.