STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHL99538.1KEGG: lsg:lse_2648 1.2e-31 HAD-superfamily hydrolase, subfamily IA, variant 1. (209 aa)    
Predicted Functional Partners:
EHL95715.1
Haloacid dehalogenase-like hydrolase.
  
  
  0.887
EHL95235.1
Haloacid dehalogenase-like hydrolase; KEGG: amu:Amuc_0740 2.5e-36 haloacid dehalogenase domain protein hydrolase; K01091 phosphoglycolate phosphatase; Psort location: Cytoplasmic, score: 8.96.
  
  
  0.877
phnX-2
2-aminoethylphosphonate--pyruvate transaminase; Involved in phosphonate degradation; Belongs to the HAD-like hydrolase superfamily. PhnX family.
  
 
 0.873
EHL95604.1
Competence/damage-inducible protein CinA domain protein; Belongs to the CinA family.
    
  0.855
EHL95696.1
FAD linked oxidase protein.
    
 0.849
EHL95697.1
Hypothetical protein.
    
 0.849
EHL99539.1
PTS system fructose IIA component; KEGG: lpl:lp_0586 1.3e-23 pts10A; mannose PTS, EIIA K02793; Psort location: Cytoplasmic, score: 9.26.
       0.531
EHL99540.1
KEGG: ppe:PEPE_1513 1.9e-47 phosphotransferase system, mannose/fructose-specific component IIB; K02769 PTS system, fructose-specific IIB component; Psort location: Cytoplasmic, score: 9.26.
       0.531
EHL99541.1
KEGG: sds:SDEG_1807 9.8e-51 manM; PTS system, mannose-specific IIC component K02795; Psort location: CytoplasmicMembrane, score: 10.00.
       0.517
EHL99542.1
PTS system, mannose/fructose/sorbose family, IID component; KEGG: ecp:ECP_1762 1.4e-58 PTS system mannose-specific transporter subunit IID K02796; Psort location: CytoplasmicMembrane, score: 10.00.
       0.487
Your Current Organism:
Lactobacillus parafarraginis
NCBI taxonomy Id: 797515
Other names: L. parafarraginis F0439, Lactobacillus parafarraginis F0439, Lactobacillus parafarraginis str. F0439, Lactobacillus parafarraginis strain F0439, Lactobacillus sp. oral taxon 418 str. F0439
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