STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHL99315.1Carbohydrate kinase, FGGY family protein; KEGG: lbr:LVIS_1742 1.5e-196 L-ribulokinase (putative); K00853 L-ribulokinase. (535 aa)    
Predicted Functional Partners:
EHL99316.1
KEGG: lgs:LEGAS_1792 3.7e-106 ulaF; L-ribulose-5-phosphate 4-epimerase; K01786 L-ribulose-5-phosphate 4-epimerase; Psort location: Cytoplasmic, score: 8.96.
 
 
 0.988
araA-2
L-arabinose isomerase; Catalyzes the conversion of L-arabinose to L-ribulose.
 
 
 0.977
araA
L-arabinose isomerase; Catalyzes the conversion of L-arabinose to L-ribulose.
 
 
 0.968
EHL96079.1
KEGG: lbr:LVIS_0960 1.3e-89 pentose-5-phosphate-3-epimerase; K01783 ribulose-phosphate 3-epimerase; Psort location: Cytoplasmic, score: 9.97.
    
 0.904
EHL98505.1
Putative arabinose metabolism transcriptional repressor; KEGG: ctu:Ctu_01760 5.4e-27 cytR; DNA-binding transcriptional regulator CytR; Psort location: Cytoplasmic, score: 9.97.
 
 
   0.789
EHL98471.1
KEGG: lbr:LVIS_0144 3.6e-108 6-phosphogluconate dehydrogenase-like protein; K00033 6-phosphogluconate dehydrogenase; Psort location: Cytoplasmic, score: 9.26.
  
 
 0.668
EHL99317.1
Hypothetical protein.
       0.664
EHL99318.1
Hypothetical protein; KEGG: sgo:SGO_0290 2.3e-28 copper -translocating P-type ATPase.
       0.664
EHL99320.1
Copper-exporting ATPase; KEGG: lbr:LVIS_0273 7.7e-257 cation transport ATPase; K01533 Cu2+-exporting ATPase; Psort location: CytoplasmicMembrane, score: 10.00.
  
    0.651
EHL99319.1
Hypothetical protein; KEGG: snc:HMPREF0837_11012 1.1e-12 copper-translocating P family ATPase.
       0.650
Your Current Organism:
Lactobacillus parafarraginis
NCBI taxonomy Id: 797515
Other names: L. parafarraginis F0439, Lactobacillus parafarraginis F0439, Lactobacillus parafarraginis str. F0439, Lactobacillus parafarraginis strain F0439, Lactobacillus sp. oral taxon 418 str. F0439
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.