STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHL99327.1Serine-type D-Ala-D-Ala carboxypeptidase; KEGG: lbr:LVIS_0271 5.3e-75 D-alanyl-D-alanine carboxypeptidase; K07258 D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 5/6); Psort location: CytoplasmicMembrane, score: 9.97; Belongs to the peptidase S11 family. (436 aa)    
Predicted Functional Partners:
EHM00757.1
Hypothetical protein; KEGG: lre:Lreu_0587 4.7e-22 peptidoglycan glycosyltransferase K08724; Psort location: CytoplasmicMembrane, score: 9.82.
  
 
 0.911
EHM00503.1
Serine-type D-Ala-D-Ala carboxypeptidase; KEGG: lbr:LVIS_2055 1.5e-70 D-alanyl-D-alanine carboxypeptidase; K07258 D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 5/6); Psort location: CytoplasmicMembrane, score: 10.00; Belongs to the peptidase S11 family.
 
  
 
0.897
EHL95889.1
Penicillin-binding protein, 1A family; KEGG: lbr:LVIS_0851 1.1e-241 membrane carboxypeptidase (penicillin-binding protein); K05366 penicillin-binding protein 1A.
  
 
 0.887
EHL95965.1
KEGG: lpj:JDM1_1672 1.4e-69 lytH; N-acetylmuramoyl-L-alanine amidase; K01448 N-acetylmuramoyl-L-alanine amidase.
   
 
 0.867
EHM01475.1
Penicillin-binding protein, 1A family; KEGG: lbr:LVIS_1489 1.0e-215 membrane carboxypeptidase (penicillin-binding protein); K12555 penicillin-binding protein 2A; Psort location: CytoplasmicMembrane, score: 9.82.
   
 
 0.864
EHL99328.1
Ser/Thr phosphatase family protein; KEGG: lpl:lp_3251 3.4e-57 3',5'-cyclic-nucleotide phosphodiesterase K01120; Psort location: Cytoplasmic, score: 9.97.
       0.615
tig
Trigger factor; Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase; Belongs to the FKBP-type PPIase family. Tig subfamily.
  
    0.528
EHL99326.1
Glycosyltransferase, group 2 family protein; KEGG: bde:BDP_1848 1.8e-28 glycosyl transferase, family 2; Psort location: CytoplasmicMembrane, score: 9.82.
  
    0.462
EHL95684.1
N-acetylmuramoyl-L-alanine amidase.
     
 0.425
EHL99631.1
Penicillin-binding protein, transpeptidase domain protein; KEGG: efa:EF2857 4.9e-120 penicillin-binding protein 2B; K00687 penicillin-binding protein 2B.
  
 
 0.407
Your Current Organism:
Lactobacillus parafarraginis
NCBI taxonomy Id: 797515
Other names: L. parafarraginis F0439, Lactobacillus parafarraginis F0439, Lactobacillus parafarraginis str. F0439, Lactobacillus parafarraginis strain F0439, Lactobacillus sp. oral taxon 418 str. F0439
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.