STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
birAbiotin--[acetyl-CoA-carboxylase] ligase; Acts both as a biotin--[acetyl-CoA-carboxylase] ligase and a repressor; Belongs to the biotin--protein ligase family. (330 aa)    
Predicted Functional Partners:
EHL99247.1
KEGG: lhe:lhv_1925 3.7e-202 biotin carboxylase; K01961 acetyl-CoA carboxylase, biotin carboxylase subunit; Psort location: Cytoplasmic, score: 9.97.
 
  
 0.997
EHL99245.1
acetyl-CoA carboxylase, biotin carboxyl carrier protein; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA.
 
 
 
 0.972
EHL96656.1
Universal bacterial protein YeaZ; KEGG: sgo:SGO_0221 6.8e-43 glycoprotein endopeptidase K01409.
 
    0.971
EHL99252.1
BioY family protein; KEGG: lsp:Bsph_2383 8.0e-17 biotin synthase K03523; Psort location: CytoplasmicMembrane, score: 10.00.
 
   
 0.927
EHL95250.1
KEGG: apb:SAR116_2220 1.2e-13 transcriptional regulator, AsnC family; Psort location: Cytoplasmic, score: 9.97.
   
 
 0.909
EHL99242.1
KEGG: lhe:lhv_1930 1.8e-106 hypothetical protein; K00645 [acyl-carrier-protein] S-malonyltransferase; Psort location: Cytoplasmic, score: 9.97.
 
   
 0.877
EHL99244.1
Beta-ketoacyl-acyl-carrier-protein synthase II; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP.
 
   
 0.849
cca
Putative tRNA adenylyltransferase; Catalyzes the addition and repair of the essential 3'- terminal CCA sequence in tRNAs without using a nucleic acid template. Adds these three nucleotides in the order of C, C, and A to the tRNA nucleotide-73, using CTP and ATP as substrates and producing inorganic pyrophosphate.
  
  
 0.845
EHL95270.1
KEGG: lbr:LVIS_0679 2.9e-99 exonuclease III; K01142 exodeoxyribonuclease III; Psort location: Cytoplasmic, score: 9.97.
  
    0.838
EHM00162.1
Putative guanine deaminase; KEGG: lca:LSEI_1136 1.2e-43 cytosine/adenosine deaminase; K01487 guanine deaminase; Psort location: Cytoplasmic, score: 9.26.
  
    0.835
Your Current Organism:
Lactobacillus parafarraginis
NCBI taxonomy Id: 797515
Other names: L. parafarraginis F0439, Lactobacillus parafarraginis F0439, Lactobacillus parafarraginis str. F0439, Lactobacillus parafarraginis strain F0439, Lactobacillus sp. oral taxon 418 str. F0439
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