STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHL99252.1BioY family protein; KEGG: lsp:Bsph_2383 8.0e-17 biotin synthase K03523; Psort location: CytoplasmicMembrane, score: 10.00. (203 aa)    
Predicted Functional Partners:
ecfT
Cobalt transport protein; Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates.
 
 0.985
ecfA
ABC transporter, ATP-binding protein; ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates.
   
 0.982
ecfA-2
ABC transporter, ATP-binding protein; ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates.
   
 0.982
EHL98776.1
Cobalt transport protein; KEGG: ljf:FI9785_387 0.0064 ABC-type cobalt transport system, permease component, CbiQ related K02008; Psort location: CytoplasmicMembrane, score: 10.00.
  
 0.972
EHL98259.1
Cobalt transport protein; KEGG: ljf:FI9785_1499 7.1e-64 ABC-type transport system, permease component K02008; Psort location: CytoplasmicMembrane, score: 10.00.
  
 0.972
EHL97946.1
Hypothetical protein; KEGG: ljf:FI9785_387 7.7e-09 ABC-type cobalt transport system, permease component, CbiQ related K02008; Psort location: CytoplasmicMembrane, score: 10.00.
  
 0.961
EHL96760.1
Cobalt transport protein; KEGG: ljf:FI9785_387 4.8e-08 ABC-type cobalt transport system, permease component, CbiQ related K02008; Psort location: CytoplasmicMembrane, score: 10.00.
  
 0.961
birA
biotin--[acetyl-CoA-carboxylase] ligase; Acts both as a biotin--[acetyl-CoA-carboxylase] ligase and a repressor; Belongs to the biotin--protein ligase family.
 
   
 0.927
EHL98777.1
ABC transporter, ATP-binding protein; KEGG: snc:HMPREF0837_11004 7.3e-55 ABC superfamily transporter ATP-binding protein K02006; Psort location: Cytoplasmic, score: 9.12.
   
 0.856
EHL99242.1
KEGG: lhe:lhv_1930 1.8e-106 hypothetical protein; K00645 [acyl-carrier-protein] S-malonyltransferase; Psort location: Cytoplasmic, score: 9.97.
 
   
 0.698
Your Current Organism:
Lactobacillus parafarraginis
NCBI taxonomy Id: 797515
Other names: L. parafarraginis F0439, Lactobacillus parafarraginis F0439, Lactobacillus parafarraginis str. F0439, Lactobacillus parafarraginis strain F0439, Lactobacillus sp. oral taxon 418 str. F0439
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.