STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHL99254.1Gluconate permease; KEGG: eci:UTI89_C3106 2.9e-67 ygbN; inner membrane permease YgbN K03299; Psort location: CytoplasmicMembrane, score: 10.00. (451 aa)    
Predicted Functional Partners:
EHL99255.1
Gluconokinase; KEGG: lbr:LVIS_1585 7.2e-222 gluconate kinase; K00851 gluconokinase; Psort location: Cytoplasmic, score: 9.97; Belongs to the FGGY kinase family.
 
  
 0.796
EHL98483.1
Gluconokinase; KEGG: lbr:LVIS_0143 8.9e-176 gluconate kinase; K00851 gluconokinase; Psort location: Cytoplasmic, score: 9.26; Belongs to the FGGY kinase family.
 
  
 0.446
EHL99253.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.82.
       0.431
EHL98471.1
KEGG: lbr:LVIS_0144 3.6e-108 6-phosphogluconate dehydrogenase-like protein; K00033 6-phosphogluconate dehydrogenase; Psort location: Cytoplasmic, score: 9.26.
  
  
 0.422
Your Current Organism:
Lactobacillus parafarraginis
NCBI taxonomy Id: 797515
Other names: L. parafarraginis F0439, Lactobacillus parafarraginis F0439, Lactobacillus parafarraginis str. F0439, Lactobacillus parafarraginis strain F0439, Lactobacillus sp. oral taxon 418 str. F0439
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.