STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHL99267.1KEGG: lbr:LVIS_1574 1.3e-142 UDP-N-acetylglucosamine 2-epimerase; K01791 UDP-N-acetylglucosamine 2-epimerase; Psort location: Cytoplasmic, score: 9.97. (367 aa)    
Predicted Functional Partners:
EHM00642.1
Glycosyltransferase, group 4 family; KEGG: lbr:LVIS_0622 1.7e-142 UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase; K13685 UDP-N-acetylglucosamine:undecaprenyl-P N-acetylglucosaminyl 1-P transferase; Psort location: CytoplasmicMembrane, score: 10.00.
 
 0.974
glmU
UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase; Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP-GlcNAc). The C- terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N- acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5-monophosphate (from uridine 5- triphosphate), a reaction catalyzed by the N-terminal domain.
    
 0.931
EHL97819.1
KEGG: lbr:LVIS_0494 5.4e-169 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790; Psort location: Cytoplasmic, score: 9.26.
  
 
  0.903
murA
UDP-N-acetylglucosamine 1-carboxyvinyltransferase; Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine; Belongs to the EPSP synthase family. MurA subfamily.
  
 
  0.903
EHL99260.1
Oxidoreductase, NAD-binding domain protein; KEGG: lpl:lp_1161 3.4e-105 oxidoreductase (putative) K00540; Psort location: Cytoplasmic, score: 8.96.
  
 
 0.861
EHL99529.1
Glycosyltransferase, WecB/TagA/CpsF family; Catalyzes the conversion of GlcNAc-PP-undecaprenol into ManNAc-GlcNAc-PP-undecaprenol, the first committed lipid intermediate in the de novo synthesis of teichoic acid.
 
  
 0.837
EHL99268.1
YihY family protein; KEGG: lsl:LSL_1266 1.7e-46 ribonuclease BN K07058; Psort location: CytoplasmicMembrane, score: 10.00; Belongs to the UPF0761 family.
       0.776
tilS
tRNA(Ile)-lysidine synthetase; Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine.
  
 
 0.746
EHL99322.1
NAD dependent epimerase/dehydratase family protein; KEGG: sax:USA300HOU_0349 7.4e-101 dehydrogenase.
  
 
 0.703
EHL99843.1
Phage transcriptional regulator, RinA family; Psort location: Cytoplasmic, score: 8.96.
  
 
 0.702
Your Current Organism:
Lactobacillus parafarraginis
NCBI taxonomy Id: 797515
Other names: L. parafarraginis F0439, Lactobacillus parafarraginis F0439, Lactobacillus parafarraginis str. F0439, Lactobacillus parafarraginis strain F0439, Lactobacillus sp. oral taxon 418 str. F0439
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.