STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHL99137.1Hypothetical protein; Psort location: Extracellular, score: 9.65. (220 aa)    
Predicted Functional Partners:
EHL99136.1
Glycosyl hydrolase family 25; KEGG: bca:BCE_2848 9.3e-23 U32 family peptidase; K01447 N-acetylmuramoyl-L-alanine amidase; Psort location: Extracellular, score: 9.65.
 
    0.949
EHL99139.1
Hypothetical protein.
 
     0.826
EHL96171.1
Hypothetical protein; KEGG: xne:XNC1_1839 1.4e-07 pbgE1; 4-amino-4-deoxy-L-arabinose transferase (lipid A modification); K07264 4-amino-4-deoxy-L-arabinose transferase; Psort location: CytoplasmicMembrane, score: 10.00.
  
     0.771
EHL99138.1
Hypothetical protein; KEGG: cai:Caci_3167 1.5e-07 beta-N-acetylhexosaminidase K01207.
       0.752
EHL96257.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00.
  
     0.723
EHL99140.1
Hypothetical protein; Belongs to the UPF0246 family.
       0.678
EHL95422.1
Hypothetical protein.
  
     0.678
EHL95334.1
Hypothetical protein; KEGG: eci:UTI89_C1627 0.00032 entS; EntS/YbdA MFS transporter.
  
     0.665
EHM01627.1
Matrixin; KEGG: lpl:lp_0600 3.7e-12 zmp2; extracellular zinc metalloproteinase (putative) K01417.
  
     0.628
EHL99141.1
Serine-type D-Ala-D-Ala carboxypeptidase; KEGG: lbr:LVIS_1825 2.1e-119 D-alanyl-D-alanine carboxypeptidase; K07258 D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 5/6); Psort location: CytoplasmicMembrane, score: 9.82; Belongs to the peptidase S11 family.
 
     0.592
Your Current Organism:
Lactobacillus parafarraginis
NCBI taxonomy Id: 797515
Other names: L. parafarraginis F0439, Lactobacillus parafarraginis F0439, Lactobacillus parafarraginis str. F0439, Lactobacillus parafarraginis strain F0439, Lactobacillus sp. oral taxon 418 str. F0439
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.