STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHL99027.1Hypothetical protein. (102 aa)    
Predicted Functional Partners:
EHL98341.1
Hypothetical protein.
  
     0.733
EHL99028.1
LICD family protein; KEGG: lbr:LVIS_0705 1.4e-74 LPS biosynthesis protein; K07271 lipopolysaccharide cholinephosphotransferase; Psort location: Cytoplasmic, score: 8.96.
 
     0.697
EHL98552.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
  
     0.680
EHL98758.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
  
     0.670
EHL98579.1
Hypothetical protein.
  
     0.669
EHL98781.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.82.
  
     0.640
EHL97824.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
  
     0.625
EHM00264.1
Hypothetical protein; KEGG: rpc:RPC_2239 0.0094 DNA topoisomerase I K03168.
  
     0.622
EHL97423.1
Hypothetical protein; KEGG: lbr:LVIS_1825 8.9e-17 D-alanyl-D-alanine carboxypeptidase; K07258 D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 5/6); Psort location: Periplasmic, score: 9.84.
  
     0.586
EHL98574.1
Hypothetical protein; KEGG: sce:YPR204W 1.2e-05 Helicase-like protein encoded within the telomeric Y' element; Psort location: Extracellular, score: 9.65.
  
     0.583
Your Current Organism:
Lactobacillus parafarraginis
NCBI taxonomy Id: 797515
Other names: L. parafarraginis F0439, Lactobacillus parafarraginis F0439, Lactobacillus parafarraginis str. F0439, Lactobacillus parafarraginis strain F0439, Lactobacillus sp. oral taxon 418 str. F0439
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.