STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHL99028.1LICD family protein; KEGG: lbr:LVIS_0705 1.4e-74 LPS biosynthesis protein; K07271 lipopolysaccharide cholinephosphotransferase; Psort location: Cytoplasmic, score: 8.96. (274 aa)    
Predicted Functional Partners:
EHL99027.1
Hypothetical protein.
 
     0.697
EHL99029.1
Transcriptional regulator, MarR family; KEGG: apb:SAR116_2205 1.2e-06 transcriptional regulator; Psort location: Cytoplasmic, score: 8.96.
 
     0.653
EHL95168.1
Hypothetical protein; KEGG: lpl:lp_0843 1.2e-47 ppx3; exopolyphosphatase K01514.
 
     0.573
EHL95169.1
Hypothetical protein; KEGG: lpl:lp_0843 7.1e-80 ppx3; exopolyphosphatase K01514; Psort location: Cytoplasmic, score: 9.97.
 
      0.530
EHM00715.1
Hypothetical protein.
  
     0.513
EHM01483.1
Hypothetical protein.
  
     0.424
EHL99136.1
Glycosyl hydrolase family 25; KEGG: bca:BCE_2848 9.3e-23 U32 family peptidase; K01447 N-acetylmuramoyl-L-alanine amidase; Psort location: Extracellular, score: 9.65.
  
     0.413
Your Current Organism:
Lactobacillus parafarraginis
NCBI taxonomy Id: 797515
Other names: L. parafarraginis F0439, Lactobacillus parafarraginis F0439, Lactobacillus parafarraginis str. F0439, Lactobacillus parafarraginis strain F0439, Lactobacillus sp. oral taxon 418 str. F0439
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.