STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHL99054.1Hypothetical protein; Psort location: Cytoplasmic, score: 8.96. (258 aa)    
Predicted Functional Partners:
EHM01134.1
Putative S-layer protein; KEGG: sab:SAB0919c 2.0e-06 atl; autolysin; K13714 bifunctional autolysin.
  
     0.605
EHL98574.1
Hypothetical protein; KEGG: sce:YPR204W 1.2e-05 Helicase-like protein encoded within the telomeric Y' element; Psort location: Extracellular, score: 9.65.
  
     0.575
EHL95422.1
Hypothetical protein.
  
     0.575
EHM00100.1
Hypothetical protein; KEGG: vfi:VF_1261 6.6e-06 lactoylglutathione lyase family protein; Psort location: Cytoplasmic, score: 8.96.
  
     0.568
EHL98916.1
KEGG: bmd:BMD_3135 3.1e-10 CAAX amino terminal protease family protein; Psort location: CytoplasmicMembrane, score: 10.00.
  
     0.527
EHL99137.1
Hypothetical protein; Psort location: Extracellular, score: 9.65.
  
     0.514
EHL98917.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00.
  
     0.488
EHM01276.1
Peptidase, M23 family; KEGG: bsu:BSU21350 4.9e-07 yomI; SPbeta phage protein; lytic transglycosylase.
  
     0.484
EHL95630.1
Hypothetical protein.
  
     0.477
EHM00515.1
Beta-lactamase; KEGG: lcb:LCABL_23180 3.1e-38 pbpX1; serine-type D-Ala-D-Ala carboxypeptidase; Psort location: CytoplasmicMembrane, score: 9.97.
  
     0.474
Your Current Organism:
Lactobacillus parafarraginis
NCBI taxonomy Id: 797515
Other names: L. parafarraginis F0439, Lactobacillus parafarraginis F0439, Lactobacillus parafarraginis str. F0439, Lactobacillus parafarraginis strain F0439, Lactobacillus sp. oral taxon 418 str. F0439
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.