STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHL99063.1KEGG: sds:SDEG_1426 2.3e-12 CAAX amino terminal protease family protein; Psort location: CytoplasmicMembrane, score: 10.00. (150 aa)    
Predicted Functional Partners:
EHL99064.1
Peptidase family T4; KEGG: aco:Amico_1650 1.1e-83 peptidase S58 DmpA; K01266 D-aminopeptidase.
       0.737
EHL99065.1
Hypothetical protein; KEGG: lla:L87107 3.8e-12 pspA; glucosyltransferase-S.
       0.737
EHM00437.1
Glycosyl hydrolase family 25; KEGG: lpl:lp_3093 2.5e-32 muramidase (putative) K01185.
    
   0.595
EHM01437.1
Putative ACR; Psort location: Cytoplasmic, score: 8.96.
  
     0.486
EHL99067.1
Putative o-succinylbenzoate synthase; KEGG: bao:BAMF_1386 2.0e-82 ykfB; L-Ala-D/L-Glu epimerase.
       0.457
EHL99066.1
ABC transporter, substrate-binding protein, family 5; KEGG: esi:Exig_2061 3.2e-93 4-phytase K02035; Psort location: Periplasmic, score: 10.00.
       0.455
EHL99223.1
CamS sex pheromone family protein; Psort location: OuterMembrane, score: 9.49.
  
     0.426
EHL99062.1
Pro-kumamolisin, activation domain protein; KEGG: rsa:RSal33209_3166 5.9e-37 pseudomonapepsin precursor.
       0.414
EHM00757.1
Hypothetical protein; KEGG: lre:Lreu_0587 4.7e-22 peptidoglycan glycosyltransferase K08724; Psort location: CytoplasmicMembrane, score: 9.82.
 
     0.400
Your Current Organism:
Lactobacillus parafarraginis
NCBI taxonomy Id: 797515
Other names: L. parafarraginis F0439, Lactobacillus parafarraginis F0439, Lactobacillus parafarraginis str. F0439, Lactobacillus parafarraginis strain F0439, Lactobacillus sp. oral taxon 418 str. F0439
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.