STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHL99016.1Putative bactoprenol glucosyl transferase-like protein; KEGG: lca:LSEI_0708 3.4e-89 glycosyltransferase-like protein; K00721 dolichol-phosphate mannosyltransferase; Psort location: CytoplasmicMembrane, score: 10.00. (337 aa)    
Predicted Functional Partners:
EHL99017.1
KEGG: bmd:BMD_2070 1.1e-131 dolichyl-phosphate-mannose-mannosyltransferase domain-containing protein; Psort location: CytoplasmicMembrane, score: 10.00.
 
 
 0.899
EHL99018.1
GtrA-like protein; KEGG: asc:ASAC_0195 0.0046 dolichol-phosphate mannosyltransferase K00721; Psort location: CytoplasmicMembrane, score: 9.82.
 
 
 0.872
EHL99019.1
Hypothetical protein.
       0.757
fmt
methionyl-tRNA formyltransferase; Attaches a formyl group to the free amino group of methionyl- tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus; Belongs to the Fmt family.
 
 
 0.647
EHL99021.1
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; KEGG: lcb:LCABL_07770 3.8e-97 ciaH; sensor protein; Psort location: CytoplasmicMembrane, score: 10.00.
   
 
 0.602
EHL99265.1
Putative cell wall teichoic acid glycosylation protein GtcA; Psort location: CytoplasmicMembrane, score: 10.00.
 
 
 0.586
EHL99020.1
Putative response regulator ArlR; KEGG: rru:Rru_A0525 3.7e-35 two component transcriptional regulator / cell cycle transcriptional regulator CtrA K13584; Psort location: Cytoplasmic, score: 9.97.
     
 0.560
EHM00620.1
KEGG: lpj:JDM1_0626 7.1e-112 galU; UTP-glucose-1-phosphate uridylyltransferase; K00963 UTP--glucose-1-phosphate uridylyltransferase; Psort location: Cytoplasmic, score: 9.97.
    
 0.463
EHM00154.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00.
 
  
 0.437
EHL99120.1
KEGG: bts:Btus_0864 1.7e-92 dTDP-glucose 4,6-dehydratase; K01710 dTDP-glucose 4,6-dehydratase; Psort location: Cytoplasmic, score: 9.97; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily.
 
 
 0.436
Your Current Organism:
Lactobacillus parafarraginis
NCBI taxonomy Id: 797515
Other names: L. parafarraginis F0439, Lactobacillus parafarraginis F0439, Lactobacillus parafarraginis str. F0439, Lactobacillus parafarraginis strain F0439, Lactobacillus sp. oral taxon 418 str. F0439
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