STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHL99023.1Competence protein CoiA-like protein; Psort location: Cytoplasmic, score: 8.96. (381 aa)    
Predicted Functional Partners:
divIB
Cell division protein FtsQ; Cell division protein that may be involved in stabilizing or promoting the assembly of the division complex; Belongs to the FtsQ/DivIB family. DivIB subfamily.
  
     0.749
ezrA
Septation ring formation regulator EzrA; Negative regulator of FtsZ ring formation; modulates the frequency and position of FtsZ ring formation. Inhibits FtsZ ring formation at polar sites. Interacts either with FtsZ or with one of its binding partners to promote depolymerization; Belongs to the EzrA family.
  
     0.739
EHL95803.1
Hypothetical protein; KEGG: lbr:LVIS_1191 1.9e-86 adenine-specific DNA methylase; K00571 site-specific DNA-methyltransferase (adenine-specific).
  
     0.733
EHL95584.1
Hypothetical protein; Belongs to the UPF0473 family.
  
     0.715
EHL99024.1
Oligoendopeptidase F, plasmid domain protein; KEGG: lsl:LSL_0398 5.6e-80 oligoendopeptidase F K08602; Psort location: Cytoplasmic, score: 9.97.
       0.661
EHL98611.1
Hypothetical protein; KEGG: pyo:PY00139 0.0060 erythrocyte membrane protein; K09561 STIP1 homology and U-box containing protein 1.
  
     0.645
EHM00770.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
  
     0.634
EHM01452.1
Replication initiation and membrane attachment protein, DnaB/DnaD family; KEGG: bpu:BPUM_2543 1.2e-31 dnaB; replicative DNA helicase K03346; Psort location: Cytoplasmic, score: 8.96.
  
     0.628
EHL99175.1
Bacterial peptidase A24 protein; KEGG: sga:GALLO_0591 4.8e-26 putative peptidase; K02236 leader peptidase (prepilin peptidase) / N-methyltransferase; Psort location: CytoplasmicMembrane, score: 10.00.
   
  
 0.605
EHL95580.1
Hypothetical protein.
  
     0.590
Your Current Organism:
Lactobacillus parafarraginis
NCBI taxonomy Id: 797515
Other names: L. parafarraginis F0439, Lactobacillus parafarraginis F0439, Lactobacillus parafarraginis str. F0439, Lactobacillus parafarraginis strain F0439, Lactobacillus sp. oral taxon 418 str. F0439
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