STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHL98970.1KEGG: bpo:BP951000_0587 7.7e-32 ptsG; PTS system glucose subfamily transporter subunit IIA; K02763 PTS system, D-glucosamine-specific IIA component; K02764 PTS system, D-glucosamine-specific IIB component K02765; Psort location: CytoplasmicMembrane, score: 10.00. (654 aa)    
Predicted Functional Partners:
EHL98969.1
Hypothetical protein.
       0.723
EHL96834.1
KEGG: ppe:PEPE_0204 3.8e-113 beta-galactosidase; K01190 beta-galactosidase.
  
    0.615
EHL98971.1
Hypothetical protein.
 
     0.555
EHL96836.1
Glycosyl hydrolase family 2, sugar binding domain protein; KEGG: lpl:lp_3483 1.1e-92 lacL; beta-galactosidase, large subunit K01190; Psort location: Cytoplasmic, score: 8.96; Belongs to the glycosyl hydrolase 2 family.
  
    0.503
EHL98972.1
Hypothetical protein.
       0.459
EHL96835.1
Glycosyl hydrolase family 2, TIM barrel domain protein; KEGG: lac:LBA1467 1.7e-135 lacL; beta-galactosidase large subunit (lactase) K01190; Psort location: Cytoplasmic, score: 8.96.
  
    0.445
Your Current Organism:
Lactobacillus parafarraginis
NCBI taxonomy Id: 797515
Other names: L. parafarraginis F0439, Lactobacillus parafarraginis F0439, Lactobacillus parafarraginis str. F0439, Lactobacillus parafarraginis strain F0439, Lactobacillus sp. oral taxon 418 str. F0439
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.