STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHL98917.1Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00. (273 aa)    
Predicted Functional Partners:
EHL98918.1
KEGG: mcu:HMPREF0573_11034 3.5e-39 ABC transporter ATP-binding protein.
 
    0.954
EHL98919.1
KEGG: bcz:BCZK3833 8.5e-13 GntR family transcriptional regulator K07979; Psort location: Cytoplasmic, score: 8.96.
 
     0.894
EHL98916.1
KEGG: bmd:BMD_3135 3.1e-10 CAAX amino terminal protease family protein; Psort location: CytoplasmicMembrane, score: 10.00.
 
     0.773
EHL95262.1
Matrixin; KEGG: lpl:lp_2988 4.7e-35 zmp3; extracellular zinc metalloproteinase (putative) K01417.
  
     0.674
EHL99054.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
  
     0.488
EHL98920.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.82.
       0.488
EHL97057.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.82.
  
     0.470
EHM00861.1
Hypothetical protein; KEGG: cco:CCC13826_2309 2.9e-74 hydrogenase-4 component C; Psort location: Cytoplasmic, score: 8.96.
  
     0.433
EHL98758.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
  
     0.427
rpmG
Ribosomal protein L33; KEGG: apb:SAR116_0619 0.00020 ribosomal protein L33 K02913; Psort location: Cytoplasmic, score: 9.26; Belongs to the bacterial ribosomal protein bL33 family.
       0.400
Your Current Organism:
Lactobacillus parafarraginis
NCBI taxonomy Id: 797515
Other names: L. parafarraginis F0439, Lactobacillus parafarraginis F0439, Lactobacillus parafarraginis str. F0439, Lactobacillus parafarraginis strain F0439, Lactobacillus sp. oral taxon 418 str. F0439
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.