STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHL98932.1Bacterial membrane protein YfhO; Psort location: CytoplasmicMembrane, score: 10.00. (901 aa)    
Predicted Functional Partners:
EHL98931.1
PAP2 family protein; KEGG: lsl:LSL_1484 2.3e-19 pgpB; phosphatidylglycerophosphatase B K01096; Psort location: CytoplasmicMembrane, score: 10.00.
       0.773
EHL98930.1
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; KEGG: lca:LSEI_2680 2.2e-69 signal transduction histidine kinase; K00936; Psort location: CytoplasmicMembrane, score: 10.00.
 
     0.705
EHL98933.1
Hypothetical protein; KEGG: naz:Aazo_5355 0.0024 cytochrome c oxidase; Psort location: CytoplasmicMembrane, score: 10.00.
       0.675
EHL99266.1
Putative bactoprenol glucosyl transferase-like protein; KEGG: lpl:lp_2071 1.3e-105 glycosyltransferase; Psort location: CytoplasmicMembrane, score: 10.00.
 
  
 0.465
EHL95426.1
Acetyltransferase, GNAT family; KEGG: lbr:LVIS_1734 8.3e-54 acetyltransferase; K00680; Psort location: Cytoplasmic, score: 8.96.
  
     0.462
EHL98993.1
LPXTG-motif protein cell wall anchor domain protein; KEGG: mmw:Mmwyl1_1672 2.7e-21 beta strand repeat-containing protein; Psort location: Periplasmic, score: 8.97.
  
     0.461
EHL98929.1
KEGG: rha:RHA1_ro05622 1.4e-49 response regulator (protein-glutamate methylesterase) K07669; Psort location: Cytoplasmic, score: 9.97.
       0.409
Your Current Organism:
Lactobacillus parafarraginis
NCBI taxonomy Id: 797515
Other names: L. parafarraginis F0439, Lactobacillus parafarraginis F0439, Lactobacillus parafarraginis str. F0439, Lactobacillus parafarraginis strain F0439, Lactobacillus sp. oral taxon 418 str. F0439
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