STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHL98856.1Putative oxygen-insensitive NADPH nitroreductase; KEGG: lre:Lreu_1560 1.2e-84 nitroreductase; K00540; Belongs to the flavin oxidoreductase frp family. (252 aa)    
Predicted Functional Partners:
EHM00566.1
Riboflavin kinase; KEGG: lpl:lp_0850 6.7e-52 ribC1; bifunctional protein: riboflavin kinase; FMN adenylyltransferase K11753; Psort location: Cytoplasmic, score: 9.97; Belongs to the ribF family.
    
 0.863
EHL95981.1
Riboflavin biosynthesis protein RibF; KEGG: lbr:LVIS_1332 6.3e-88 FAD synthase; K11753 riboflavin kinase / FMN adenylyltransferase; Psort location: Cytoplasmic, score: 9.97; Belongs to the ribF family.
    
 0.863
birA
biotin--[acetyl-CoA-carboxylase] ligase; Acts both as a biotin--[acetyl-CoA-carboxylase] ligase and a repressor; Belongs to the biotin--protein ligase family.
  
    0.716
menE
O-succinylbenzoate-CoA ligase; Converts 2-succinylbenzoate (OSB) to 2-succinylbenzoyl-CoA (OSB-CoA); Belongs to the ATP-dependent AMP-binding enzyme family. MenE subfamily.
   
 
 0.708
EHM01093.1
ABC-2 type transporter; KEGG: lpj:JDM1_1639 6.2e-08 hpk6; histidine protein kinase; sensor protein; K07778 two-component system, NarL family, sensor histidine kinase DesK; Psort location: CytoplasmicMembrane, score: 10.00.
  
  
 0.616
ribA
GTP cyclohydrolase II; Catalyzes the conversion of GTP to 2,5-diamino-6- ribosylamino-4(3H)-pyrimidinone 5'-phosphate (DARP), formate and pyrophosphate; Belongs to the GTP cyclohydrolase II family. In the N-terminal section; belongs to the DHBP synthase family.
   
 
 0.548
EHL98857.1
Hypothetical protein; KEGG: lrf:LAR_0091 3.7e-18 seryl-tRNA synthetase; K01875 seryl-tRNA synthetase; Psort location: Cytoplasmic, score: 9.26.
       0.536
EHL97419.1
KEGG: aai:AARI_02020 2.8e-35 putative ABC transporter, ATPase and permease components; Psort location: CytoplasmicMembrane, score: 10.00.
  
    0.499
EHL96780.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00.
  
    0.499
EHL99309.1
Nitroreductase family protein; KEGG: lsl:LSL_0134 5.7e-71 NAD(P)H-dependent quinone reductase K00540; Psort location: Cytoplasmic, score: 9.26.
     
 0.482
Your Current Organism:
Lactobacillus parafarraginis
NCBI taxonomy Id: 797515
Other names: L. parafarraginis F0439, Lactobacillus parafarraginis F0439, Lactobacillus parafarraginis str. F0439, Lactobacillus parafarraginis strain F0439, Lactobacillus sp. oral taxon 418 str. F0439
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