STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHL98785.1Hypothetical protein; KEGG: jde:Jden_2537 4.2e-06 Orn/DAP/Arg decarboxylase 2; K01586 diaminopimelate decarboxylase. (626 aa)    
Predicted Functional Partners:
EHM00398.1
Lyase; KEGG: stc:str1345 1.0e-151 purB2; adenylosuccinate lyase; K01756 adenylosuccinate lyase; Psort location: Cytoplasmic, score: 9.97.
 
      0.878
EHL98786.1
Putative D-Ala-D-Ala dipeptidase; Catalyzes hydrolysis of the D-alanyl-D-alanine dipeptide. Belongs to the peptidase M15D family.
       0.723
EHL98465.1
NADP oxidoreductase coenzyme F420-dependent; KEGG: gox:GOX1271 2.6e-18 putative oxidoreductase K06988.
 
     0.617
nnrE
YjeF-like protein; Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S-specific NAD(P)H-hydrate dehydratase to allow the repair of both epimers of NAD(P)HX; Belongs to the NnrE/AIBP family.
       0.569
EHL98788.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
 
     0.555
lysA
Diaminopimelate decarboxylase; Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine.
    
  0.546
EHL95573.1
Hypothetical protein.
  
     0.537
EHL98341.1
Hypothetical protein.
  
     0.529
EHL96833.1
Hypothetical protein; KEGG: pfr:PFREUD_18110 9.8e-83 pf1655; carboxylic ester hydrolase.
  
     0.517
EHL98611.1
Hypothetical protein; KEGG: pyo:PY00139 0.0060 erythrocyte membrane protein; K09561 STIP1 homology and U-box containing protein 1.
  
     0.471
Your Current Organism:
Lactobacillus parafarraginis
NCBI taxonomy Id: 797515
Other names: L. parafarraginis F0439, Lactobacillus parafarraginis F0439, Lactobacillus parafarraginis str. F0439, Lactobacillus parafarraginis strain F0439, Lactobacillus sp. oral taxon 418 str. F0439
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.