STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHL98720.1Hypothetical protein. (137 aa)    
Predicted Functional Partners:
EHL98718.1
Hypothetical protein.
       0.668
EHL98715.1
Hypothetical protein; KEGG: mmh:Mmah_0594 0.00012 ABC transporter related protein; K02013 iron complex transport system ATP-binding protein.
       0.500
EHL98716.1
KEGG: apb:SAR116_1706 0.00022 DNA-binding protein.
       0.500
EHL98717.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.82.
       0.500
EHL98719.1
KEGG: cbk:CLL_A3505 0.0055 hypothetical protein; K03101 signal peptidase II; Psort location: CytoplasmicMembrane, score: 10.00.
       0.500
EHL98721.1
KEGG: lbr:LVIS_2298 1.1e-49 signal peptidase I; K03100 signal peptidase I; Psort location: CytoplasmicMembrane, score: 9.82; Belongs to the peptidase S26 family.
       0.413
Your Current Organism:
Lactobacillus parafarraginis
NCBI taxonomy Id: 797515
Other names: L. parafarraginis F0439, Lactobacillus parafarraginis F0439, Lactobacillus parafarraginis str. F0439, Lactobacillus parafarraginis strain F0439, Lactobacillus sp. oral taxon 418 str. F0439
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.