STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHL98640.1Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.46. (200 aa)    
Predicted Functional Partners:
EHL98639.1
Hypothetical protein; KEGG: eci:UTI89_C4210 1.4e-09 yicJ; putative transporter K03292; Psort location: CytoplasmicMembrane, score: 10.00.
     0.994
EHM00448.1
Hypothetical protein; KEGG: eci:UTI89_C4210 3.2e-10 yicJ; putative transporter K03292; Psort location: CytoplasmicMembrane, score: 10.00.
 
     0.976
EHL98487.1
Transporter, major facilitator family protein; KEGG: eci:UTI89_C4210 3.9e-47 yicJ; putative transporter K03292; Psort location: CytoplasmicMembrane, score: 10.00.
  
     0.722
EHL98644.1
Hypothetical protein; KEGG: lrl:LC705_02433 2.7e-64 alpha-L-rhamnosidase; K05989 alpha-L-rhamnosidase.
  
     0.709
EHL98646.1
KEGG: lrl:LC705_02433 1.1e-184 alpha-L-rhamnosidase; K05989 alpha-L-rhamnosidase.
 
     0.699
EHL98268.1
Hypothetical protein; KEGG: spu:584891 1.6e-20 similar to LOC446948 protein; K01202 galactosylceramidase.
  
     0.595
EHL97573.1
Transporter, major facilitator family protein; KEGG: eci:UTI89_C4210 5.6e-48 yicJ; putative transporter K03292; Psort location: CytoplasmicMembrane, score: 10.00.
  
     0.459
EHL96508.1
Transporter, major facilitator family protein; KEGG: eci:UTI89_C4210 3.0e-56 yicJ; putative transporter K03292; Psort location: CytoplasmicMembrane, score: 10.00.
  
     0.455
EHL98642.1
Transcriptional regulator, AraC family; KEGG: ere:EUBREC_2332 6.6e-07 2-isopropylmalate synthase; K01649 2-isopropylmalate synthase; Psort location: Cytoplasmic, score: 9.97.
  
     0.454
EHL98638.1
Glycosyl hydrolase family 2, sugar binding domain protein; KEGG: lrh:LGG_00050 1.6e-146 uidA; beta-glucuronidase (GH2); K01195 beta-glucuronidase; Belongs to the glycosyl hydrolase 2 family.
 
    0.425
Your Current Organism:
Lactobacillus parafarraginis
NCBI taxonomy Id: 797515
Other names: L. parafarraginis F0439, Lactobacillus parafarraginis F0439, Lactobacillus parafarraginis str. F0439, Lactobacillus parafarraginis strain F0439, Lactobacillus sp. oral taxon 418 str. F0439
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.