STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHL98631.1adenosylcobinamide-GDP ribazoletransferase; Joins adenosylcobinamide-GDP and alpha-ribazole to generate adenosylcobalamin (Ado-cobalamin). Also synthesizes adenosylcobalamin 5'-phosphate from adenosylcobinamide-GDP and alpha-ribazole 5'- phosphate. (258 aa)    
Predicted Functional Partners:
EHL96711.1
Phosphoglycerate mutase family protein; KEGG: ssa:SSA_0491 7.6e-28 alpha-ribazole-5'-phosphate phosphatase, putative K02226; Belongs to the phosphoglycerate mutase family.
 
 
 0.977
EHM01039.1
Phosphoglycerate mutase family protein; KEGG: ssa:SSA_0491 1.9e-24 alpha-ribazole-5'-phosphate phosphatase, putative K02226; Psort location: Cytoplasmic, score: 8.96.
 
 
 0.965
EHM00855.1
KEGG: gct:GC56T3_1247 1.9e-31 ATP/cobalamin adenosyltransferase; Psort location: Cytoplasmic, score: 9.97; Belongs to the Cob(I)alamin adenosyltransferase family.
 
  
 0.895
EHL97522.1
KEGG: lhe:lhv_0047 2.1e-87 phosphoglycerate mutase; K01834 phosphoglycerate mutase.
 
 
 0.887
EHL96713.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
 
    0.795
EHL96714.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00.
 
     0.775
EHM00723.1
Phosphoglycerate mutase family protein.
 
 
 0.466
EHM01237.1
Putative ethanolamine utilization protein EutJ; KEGG: acp:A2cp1_2371 4.8e-06 chaperone protein DnaK K04043; Psort location: Cytoplasmic, score: 8.96.
  
     0.405
EHM01260.1
Helicase IV domain protein; KEGG: lbr:LVIS_1762 3.2e-171 superfamily I DNA/RNA helicase; K03657 DNA helicase II / ATP-dependent DNA helicase PcrA; Psort location: Cytoplasmic, score: 8.96.
   
    0.402
EHM01261.1
Hypothetical protein; KEGG: lbr:LVIS_1762 2.9e-76 superfamily I DNA/RNA helicase; K03657 DNA helicase II / ATP-dependent DNA helicase PcrA; Psort location: Cytoplasmic, score: 8.96.
   
    0.402
Your Current Organism:
Lactobacillus parafarraginis
NCBI taxonomy Id: 797515
Other names: L. parafarraginis F0439, Lactobacillus parafarraginis F0439, Lactobacillus parafarraginis str. F0439, Lactobacillus parafarraginis strain F0439, Lactobacillus sp. oral taxon 418 str. F0439
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