STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHL98591.1Bacterial group 3 Ig-like protein; KEGG: lsg:lse_0353 0.0099 cell wall surface anchor family protein, putative. (820 aa)    
Predicted Functional Partners:
EHL96229.1
Hypothetical protein; KEGG: sha:SH1364 0.0097 pbp3; penicillin-binding protein 3; K12553 penicillin-binding protein 3; Psort location: Extracellular, score: 9.64.
  
 0.901
EHL95108.1
Hypothetical protein.
  
     0.748
EHL95113.1
Hypothetical protein.
  
     0.714
EHM00955.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00.
  
     0.704
EHL97125.1
Hypothetical protein.
  
     0.702
EHL99136.1
Glycosyl hydrolase family 25; KEGG: bca:BCE_2848 9.3e-23 U32 family peptidase; K01447 N-acetylmuramoyl-L-alanine amidase; Psort location: Extracellular, score: 9.65.
  
     0.697
EHL98574.1
Hypothetical protein; KEGG: sce:YPR204W 1.2e-05 Helicase-like protein encoded within the telomeric Y' element; Psort location: Extracellular, score: 9.65.
  
     0.675
EHL96898.1
Putative S-layer protein; KEGG: chu:CHU_2149 2.5e-07 glycoside hydrolase family 5 protein K01238.
  
     0.671
EHL97214.1
Peptidase, C39 family; KEGG: spx:SPG_0480 2.1e-25 blpA; ABC transporter ATP-binding protein BlpA; Psort location: CytoplasmicMembrane, score: 9.82.
  
 
 0.646
EHL98469.1
Glycosyl hydrolase family 25; KEGG: bce:BCp0021 1.8e-26 N-acetylmuramoyl-L-alanine amidase; Psort location: OuterMembrane, score: 9.52.
  
     0.642
Your Current Organism:
Lactobacillus parafarraginis
NCBI taxonomy Id: 797515
Other names: L. parafarraginis F0439, Lactobacillus parafarraginis F0439, Lactobacillus parafarraginis str. F0439, Lactobacillus parafarraginis strain F0439, Lactobacillus sp. oral taxon 418 str. F0439
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.