STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHL98438.1HD domain protein; KEGG: bmq:BMQ_1985 4.6e-37 metal-dependent phosphohydrolase K06950; Psort location: Cytoplasmic, score: 8.96. (213 aa)    
Predicted Functional Partners:
ribA
GTP cyclohydrolase II; Catalyzes the conversion of GTP to 2,5-diamino-6- ribosylamino-4(3H)-pyrimidinone 5'-phosphate (DARP), formate and pyrophosphate; Belongs to the GTP cyclohydrolase II family. In the N-terminal section; belongs to the DHBP synthase family.
    
  0.857
kptA
Putative RNA 2'-phosphotransferase-like protein; Removes the 2'-phosphate from RNA via an intermediate in which the phosphate is ADP-ribosylated by NAD followed by a presumed transesterification to release the RNA and generate ADP-ribose 1''-2''- cyclic phosphate (APPR>P). May function as an ADP-ribosylase.
 
      0.676
EHL98437.1
Hypothetical protein.
       0.664
folE
GTP cyclohydrolase I; KEGG: lhe:lhv_1202 6.3e-143 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase/GTP cyclohydrolase I; K00950 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase K01495; Psort location: Cytoplasmic, score: 9.97.
    
 0.468
EHL98436.1
Hypothetical protein; KEGG: apb:SAR116_2179 2.2e-07 predicted permease K07090; Psort location: CytoplasmicMembrane, score: 10.00.
       0.459
EHL95148.1
KEGG: apb:SAR116_2509 1.2e-07 molybdopterin-guanine dinucleotide biosynthesis protein B.
    
  0.439
EHL95406.1
Deoxyguanosine kinase; KEGG: lbr:LVIS_1711 5.3e-75 deoxynucleoside kinase; K00904 deoxyguanosine kinase.
 
     0.427
Your Current Organism:
Lactobacillus parafarraginis
NCBI taxonomy Id: 797515
Other names: L. parafarraginis F0439, Lactobacillus parafarraginis F0439, Lactobacillus parafarraginis str. F0439, Lactobacillus parafarraginis strain F0439, Lactobacillus sp. oral taxon 418 str. F0439
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