STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHL98479.1Mannitol dehydrogenase domain protein; KEGG: lbr:LVIS_0139 8.4e-196 fructuronate reductase; K00040 fructuronate reductase; Psort location: Cytoplasmic, score: 9.26. (541 aa)    
Predicted Functional Partners:
uxuA
Mannonate dehydratase; Catalyzes the dehydration of D-mannonate.
 
 0.994
uxaC
KEGG: lbr:LVIS_0135 6.9e-185 glucuronate isomerase K01812; Psort location: Cytoplasmic, score: 8.96.
 
 
 0.993
uxaC-2
Glucuronate isomerase; KEGG: lsa:LSA0129 6.9e-224 uxaC; glucuronate isomerase K01812; Psort location: Cytoplasmic, score: 8.96.
 
 
 0.987
EHL98488.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
 
  
  0.943
EHL98478.1
Transcriptional regulator, GntR family; KEGG: hiq:CGSHiGG_02770 8.4e-09 D-mannonate oxidoreductase K13637; Psort location: Cytoplasmic, score: 9.97.
 
   
 0.884
EHL97080.1
GroES-like protein; KEGG: lci:LCK_00353 1.6e-130 threonine dehydrogenase; Psort location: Cytoplasmic, score: 9.97.
    
 0.864
EHL97086.1
Putative chlorophyll synthesis pathway protein BchC; KEGG: lci:LCK_00353 1.6e-128 threonine dehydrogenase; Psort location: Cytoplasmic, score: 9.97.
    
 0.864
EHL96843.1
KEGG: apb:SAR116_0310 2.0e-08 transcriptional regulator, GntR family; Psort location: Cytoplasmic, score: 9.97.
 
   
 0.765
EHM01099.1
KEGG: apb:SAR116_0310 9.0e-08 transcriptional regulator, GntR family; Psort location: Cytoplasmic, score: 9.97.
 
   
 0.745
EHL98996.1
Hypothetical protein.
  
 
 0.724
Your Current Organism:
Lactobacillus parafarraginis
NCBI taxonomy Id: 797515
Other names: L. parafarraginis F0439, Lactobacillus parafarraginis F0439, Lactobacillus parafarraginis str. F0439, Lactobacillus parafarraginis strain F0439, Lactobacillus sp. oral taxon 418 str. F0439
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.