STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHL98486.1Hypothetical protein. (56 aa)    
Predicted Functional Partners:
EHL98485.1
Hypothetical protein.
       0.773
EHL98487.1
Transporter, major facilitator family protein; KEGG: eci:UTI89_C4210 3.9e-47 yicJ; putative transporter K03292; Psort location: CytoplasmicMembrane, score: 10.00.
       0.773
EHL98484.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
       0.658
EHL98488.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
       0.610
uxaC-2
Glucuronate isomerase; KEGG: lsa:LSA0129 6.9e-224 uxaC; glucuronate isomerase K01812; Psort location: Cytoplasmic, score: 8.96.
       0.569
EHL98483.1
Gluconokinase; KEGG: lbr:LVIS_0143 8.9e-176 gluconate kinase; K00851 gluconokinase; Psort location: Cytoplasmic, score: 9.26; Belongs to the FGGY kinase family.
       0.428
Your Current Organism:
Lactobacillus parafarraginis
NCBI taxonomy Id: 797515
Other names: L. parafarraginis F0439, Lactobacillus parafarraginis F0439, Lactobacillus parafarraginis str. F0439, Lactobacillus parafarraginis strain F0439, Lactobacillus sp. oral taxon 418 str. F0439
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.