STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHL98538.12-dehydropantoate 2-reductase; Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid. (334 aa)    
Predicted Functional Partners:
EHL98537.1
Hypothetical protein; KEGG: lpj:JDM1_0305 2.9e-07 panE2; 2-dehydropantoate 2-reductase; K00077 2-dehydropantoate 2-reductase.
 
     0.922
EHL98536.1
Hypothetical protein.
       0.732
EHL96248.1
Hydratase/decarboxylase; KEGG: lpl:lp_3666 1.2e-79 2-oxo-hept-3-ene-1,7-dioate hydratase; 2-oxo-hept-4-ene-1,7-dioate hydratase K02509.
  
    0.656
folE
GTP cyclohydrolase I; KEGG: lhe:lhv_1202 6.3e-143 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase/GTP cyclohydrolase I; K00950 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase K01495; Psort location: Cytoplasmic, score: 9.97.
    
 0.602
birA
biotin--[acetyl-CoA-carboxylase] ligase; Acts both as a biotin--[acetyl-CoA-carboxylase] ligase and a repressor; Belongs to the biotin--protein ligase family.
 
   
 0.463
EHL98539.1
Phosphotransferase enzyme family protein; KEGG: pva:Pvag_1132 2.4e-33 yniA; ketosamine-3-kinase; Belongs to the fructosamine kinase family.
       0.451
Your Current Organism:
Lactobacillus parafarraginis
NCBI taxonomy Id: 797515
Other names: L. parafarraginis F0439, Lactobacillus parafarraginis F0439, Lactobacillus parafarraginis str. F0439, Lactobacillus parafarraginis strain F0439, Lactobacillus sp. oral taxon 418 str. F0439
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