STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHL98545.1OsmC-like protein. (139 aa)    
Predicted Functional Partners:
EHL98546.1
Flavodoxin-like protein; KEGG: bsu:BSU35990 4.8e-26 ywrO; nitroreductase.
  
    0.560
EHL98547.1
Hypothetical protein.
       0.549
EHM01646.1
Hypothetical protein; KEGG: ava:Ava_4725 1.4e-05 polymorphic membrane protein.
  
     0.479
EHL99727.1
S-layer domain protein; Psort location: Extracellular, score: 9.64.
  
     0.457
EHL96831.1
CAAX amino terminal protease family protein; Psort location: CytoplasmicMembrane, score: 10.00.
  
     0.457
EHL95334.1
Hypothetical protein; KEGG: eci:UTI89_C1627 0.00032 entS; EntS/YbdA MFS transporter.
  
     0.444
EHM01645.1
S-layer family protein; KEGG: chu:CHU_3220 2.9e-05 hypothetical protein K01238.
  
     0.423
EHL98543.1
ATPase family; KEGG: snc:HMPREF0837_11672 6.6e-38 clpE; ATP dependent protease K03697; Psort location: Cytoplasmic, score: 9.97.
       0.422
EHL98544.1
ATPase, AAA family; KEGG: snc:HMPREF0837_11672 1.8e-131 clpE; ATP dependent protease K03697; Psort location: Cytoplasmic, score: 9.97; Belongs to the ClpA/ClpB family.
       0.422
Your Current Organism:
Lactobacillus parafarraginis
NCBI taxonomy Id: 797515
Other names: L. parafarraginis F0439, Lactobacillus parafarraginis F0439, Lactobacillus parafarraginis str. F0439, Lactobacillus parafarraginis strain F0439, Lactobacillus sp. oral taxon 418 str. F0439
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.