STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHL98365.1Hypothetical protein; KEGG: bce:BC2899 2.2e-21 2'-5' RNA ligase. (170 aa)    
Predicted Functional Partners:
EHL95604.1
Competence/damage-inducible protein CinA domain protein; Belongs to the CinA family.
     
 0.586
EHL98366.1
Hypothetical protein; KEGG: bmq:BMQ_3964 1.5e-15 acetyltransferase, GNAT family.
       0.574
EHL98367.1
KEGG: bmq:BMQ_3964 1.8e-19 acetyltransferase, GNAT family.
       0.574
EHL98368.1
Hypothetical protein.
       0.574
EHL98370.1
Potassium uptake protein, TrkH family; KEGG: lre:Lreu_1558 2.7e-135 H(+)-transporting two-sector ATPase K03498; Psort location: CytoplasmicMembrane, score: 10.00.
       0.440
EHL98369.1
Putative Ktr system potassium uptake protein A; KEGG: apb:SAR116_0219 2.6e-05 K+ transport systems, NAD-binding component K03499; Psort location: Cytoplasmic, score: 8.96.
       0.439
Your Current Organism:
Lactobacillus parafarraginis
NCBI taxonomy Id: 797515
Other names: L. parafarraginis F0439, Lactobacillus parafarraginis F0439, Lactobacillus parafarraginis str. F0439, Lactobacillus parafarraginis strain F0439, Lactobacillus sp. oral taxon 418 str. F0439
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.