STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHL98324.1Acetyltransferase, GNAT family; KEGG: bao:BAMF_3841 2.6e-27 yycN; putative N-acetyltransferase. (147 aa)    
Predicted Functional Partners:
EHL95712.1
Acetyltransferase, GNAT family.
  
 
  0.461
EHL98323.1
LPXTG-motif protein cell wall anchor domain protein; KEGG: isc:IscW_ISCW000348 2.9e-09 secreted mucin MUC17, putative.
       0.442
EHL98325.1
Hypothetical protein; KEGG: lsl:LSL_1721 5.3e-20 acyl-CoA hydrolase K01073; Psort location: Cytoplasmic, score: 8.96.
       0.413
EHL95608.1
Peptidase M16 inactive domain protein; Overlaps another CDS with the same product name.
  
 
   0.412
Your Current Organism:
Lactobacillus parafarraginis
NCBI taxonomy Id: 797515
Other names: L. parafarraginis F0439, Lactobacillus parafarraginis F0439, Lactobacillus parafarraginis str. F0439, Lactobacillus parafarraginis strain F0439, Lactobacillus sp. oral taxon 418 str. F0439
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.