STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHL98290.1Hypothetical protein; KEGG: lcb:LCABL_29810 3.9e-24 FNV1157; methyltransferase. (105 aa)    
Predicted Functional Partners:
EHL98291.1
Hypothetical protein; KEGG: fnu:FN0736 1.4e-12 methyltransferase.
     0.992
EHL99022.1
Glutamate-cysteine ligase; KEGG: lbr:LVIS_1590 1.5e-143 gamma-glutamylcysteine synthetase; K01919 glutamate--cysteine ligase; Psort location: Cytoplasmic, score: 9.26.
     
 0.481
EHL98361.1
Peptidase family S51; KEGG: lpl:lp_1574 3.2e-45 hypothetical protein; K05995 dipeptidase E; Belongs to the peptidase S51 family.
  
     0.462
EHL97912.1
Putative modification methylase HaeIII; KEGG: mmy:MSC_0216 5.1e-102 dcm; cytosine-specific DNA-methyltransferase Sau96I; K00558 DNA (cytosine-5-)-methyltransferase; Psort location: Cytoplasmic, score: 8.96.
    
 0.437
Your Current Organism:
Lactobacillus parafarraginis
NCBI taxonomy Id: 797515
Other names: L. parafarraginis F0439, Lactobacillus parafarraginis F0439, Lactobacillus parafarraginis str. F0439, Lactobacillus parafarraginis strain F0439, Lactobacillus sp. oral taxon 418 str. F0439
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.