STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHL98278.1Hypothetical protein. (272 aa)    
Predicted Functional Partners:
EHL95965.1
KEGG: lpj:JDM1_1672 1.4e-69 lytH; N-acetylmuramoyl-L-alanine amidase; K01448 N-acetylmuramoyl-L-alanine amidase.
     
 0.852
EHL98585.1
Hypothetical protein.
 
     0.791
EHM00475.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
 
     0.785
EHL98219.1
TraG/TraD family protein; Psort location: CytoplasmicMembrane, score: 9.82.
 
     0.784
EHM00474.1
Hypothetical protein.
 
     0.728
EHL98276.1
Hypothetical protein; KEGG: ljo:LJ0913 0.0055 levansucrase precursor; K00692 levansucrase; Psort location: OuterMembrane, score: 9.52.
       0.554
EHL98277.1
Hypothetical protein.
       0.505
EHL97905.1
Hypothetical protein; KEGG: lpl:pWCFS103_22 8.3e-27 traI; DNA topoisomerase; K03169 DNA topoisomerase III.
  
     0.505
EHL97945.1
Toprim domain protein; KEGG: lpl:pWCFS103_22 6.7e-123 traI; DNA topoisomerase; K03169 DNA topoisomerase III; Psort location: Cytoplasmic, score: 9.26.
  
     0.413
Your Current Organism:
Lactobacillus parafarraginis
NCBI taxonomy Id: 797515
Other names: L. parafarraginis F0439, Lactobacillus parafarraginis F0439, Lactobacillus parafarraginis str. F0439, Lactobacillus parafarraginis strain F0439, Lactobacillus sp. oral taxon 418 str. F0439
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.