STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHL98262.1Xaa-Pro dipeptidase domain protein; KEGG: lbr:LVIS_0982 8.2e-63 aminopeptidase P; K01262 X-Pro aminopeptidase; Psort location: Cytoplasmic, score: 9.26. (204 aa)    
Predicted Functional Partners:
EHL98263.1
Creatinase; KEGG: lgs:LEGAS_0846 6.9e-19 pepP; Xaa-Pro dipeptidase; K01262 X-Pro aminopeptidase.
     0.988
EHL98264.1
Hypothetical protein; KEGG: ddd:Dda3937_01410 8.4e-06 acetyltransferase.
       0.741
EHL98265.1
Hypothetical protein.
       0.741
folD
Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain protein; Catalyzes the oxidation of 5,10-methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10- methenyltetrahydrofolate to 10-formyltetrahydrofolate.
    
 0.684
EHM00483.1
Peptidase T; Cleaves the N-terminal amino acid of tripeptides. Belongs to the peptidase M20B family.
  
 
 0.584
EHL98389.1
Putative neprilysin; KEGG: lbr:LVIS_1891 2.7e-206 neutral endopeptidase; K07386 putative endopeptidase; Psort location: Cytoplasmic, score: 9.26.
   
 
 0.584
pepT
Peptidase T; Cleaves the N-terminal amino acid of tripeptides. Belongs to the peptidase M20B family.
  
 
 0.584
EHL98266.1
TIGR00730 family protein; KEGG: mct:MCR_0842 1.7e-32 putative lysine decarboxylase K06966; Belongs to the LOG family.
       0.550
ileS
isoleucine--tRNA ligase; Catalyzes the attachment of isoleucine to tRNA(Ile). As IleRS can inadvertently accommodate and process structurally similar amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile). Belongs to the class-I aminoacyl-tRNA synthetase family. IleS type 1 subfamily.
 
 
 0.539
EHM00365.1
ComE operon protein 2; KEGG: lpj:JDM1_1785 3.8e-65 comEB; dCMP deaminase; K01493 dCMP deaminase.
  
    0.525
Your Current Organism:
Lactobacillus parafarraginis
NCBI taxonomy Id: 797515
Other names: L. parafarraginis F0439, Lactobacillus parafarraginis F0439, Lactobacillus parafarraginis str. F0439, Lactobacillus parafarraginis strain F0439, Lactobacillus sp. oral taxon 418 str. F0439
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